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  • Conference proceedings
  • © 2001

Algorithms in Bioinformatics

First International Workshop, WABI 2001, Aarhus, Denmark, August 28-31, 2001, Proceedings

Part of the book series: Lecture Notes in Computer Science (LNCS, volume 2149)

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Table of contents (23 papers)

  1. Front Matter

    Pages I-X
  2. An Improved Model for Statistical Alignment

    • István Miklós, Zoltán Toroczkai
    Pages 1-10
  3. Improving Profile-Profile Alignments via Log Average Scoring

    • Niklas von Ohsen, Ralf Zimmer
    Pages 11-26
  4. False Positives in Genomic Map Assembly and Sequence Validation

    • Thomas Anantharaman, Bud Mishra
    Pages 27-40
  5. Boosting EM for Radiation Hybrid and Genetic Mapping

    • Thomas Schiex, Patrick Chabrier, Martin Bouchez, Denis Milan
    Pages 41-51
  6. Placing Probes along the Genome Using Pairwise Distance Data

    • Will Casey, Bud Mishra, Mike Wigler
    Pages 52-68
  7. Comparing a Hidden Markov Model and a Stochastic Context-Free Grammar

    • Arun Jagota, Rune B. Lyngsø, Christian N. S. Pedersen
    Pages 69-84
  8. Assessing the Statistical Significance of Overrepresented Oligonucleotides

    • Alain Denise, Mireille Régnier, Mathias Vandenbogaert
    Pages 85-97
  9. Computing Linking Numbers of a Filtration

    • Herbert Edelsbrunner, Afra Zomorodian
    Pages 112-127
  10. Side Chain-Positioning as an Integer Programming Problem

    • Olivia Eriksson, Yishao Zhou, Arne Elofsson
    Pages 128-141
  11. A Chemical-Distance-Based Test for Positive Darwinian Selection

    • Tal Pupko, Roded Sharan, Masami Hasegawa, Ron Shamir, Dan Graur
    Pages 142-155
  12. Experiments in Computing Sequences of Reversals

    • Anne Bergeron, François Strasbourg
    Pages 164-174
  13. Finding an Optimal Inversion Median: Experimental Results

    • Adam C. Siepel, Bernard M. E. Moret
    Pages 189-203
  14. Analytic Solutions for Three-Taxon MLMC Trees with Variable Rates Across Sites

    • Benny Chor, Michael Hendy, David Penny
    Pages 204-213
  15. The Performance of Phylogenetic Methods on Trees of Bounded Diameter

    • Luay Nakhleh, Usman Roshan, Katherine St. John, Jerry Sun, Tandy Warnow
    Pages 214-226

Editors and Affiliations

  • LIRMM, Montpellier, France

    Olivier Gascuel

  • Department of Computer Science, University of New Mexico, Albuquerque, USA

    Bernard M. E. Moret

Bibliographic Information

Buy it now

Buying options

eBook USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access