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  • Conference proceedings
  • © 2014

8th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB 2014)

  • Latest research on Practical Applications of Computational Biology & Bioinformatics
  • Results of the 8th International Conference on Practical Applications of Computational Biology & Bioinformatics held at University of Salamanca (Spain), 4th-6th June, 2014
  • Discusses applications of Computational Intelligence with an interdisciplinary character, exploring the interactions between, Bioinformatics, Chemo informatics and Systems Biology

Part of the book series: Advances in Intelligent Systems and Computing (AISC, volume 294)

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Table of contents (34 papers)

  1. Front Matter

    Pages 1-13
  2. Agent-Based Model for Phenotypic Prediction Using Genomic and Environmental Data

    • Sebastien Alameda, Carole Bernon, Jean-Pierre Mano
    Pages 1-8
  3. NAPROC-13: A Carbon NMR Web Database for the Structural Elucidation of Natural Products and Food Phytochemicals

    • José Luis López-Pérez, Roberto Theron, Esther del Olmo, Beatriz Santos-Buitrago, José Francisco Adserias, Carlos Estévez et al.
    Pages 9-19
  4. Platform Image Processing Applied to the Study of Retinal Vessels

    • Pablo Chamoso, Luis García-Ortiz, José I. Recio-Rodríguez, Manuel A. Gómez-Marcos
    Pages 21-30
  5. Improving miRNA Classification Using an Exhaustive Set of Features

    • Sherin M. ElGokhy, Tetsuo Shibuya, Amin Shoukry
    Pages 31-39
  6. Designing an Ontology Tool for the Unification of Biofilms Data

    • Ana Margarida Sousa, Maria Olívia Pereira, Nuno F. Azevedo, Anália Lourenço
    Pages 41-48
  7. BEW: Bioinformatics Workbench for Analysis of Biofilms Experimental Data

    • Gael Pérez Rodríguez, Daniel Glez-Peña, Nuno F. Azevedo, Maria Olívia Pereira, Florentino Fdez-Riverola, Anália Lourenço
    Pages 49-56
  8. Discrimination of Brazilian Cassava Genotypes (Manihot esculenta Crantz) According to Their Physicochemical Traits and Functional Properties through Bioinformatics Tools

    • Rodolfo Moresco, Virgílio G. Uarrota, Eduardo da C. Nunes, Bianca Coelho, Edna Regina Amante, Vanessa Maria Gervin et al.
    Pages 57-63
  9. Prediction of Active Residues of β-galactosidase from Bacteroides thetaiotaomicron

    • Vladimir Vukić, Dajana Hrnjez, Spasenija Milanović, Mirela Iličić, Katarina Kanurić, Edward Petri
    Pages 65-71
  10. Detection of Intramolecular Tunnels Connecting Sequence of Sites in Protein Structures

    • Ondrej Strnad, Barbora Kozlikova, Jiri Sochor
    Pages 73-80
  11. Finding Class C GPCR Subtype-Discriminating N-grams through Feature Selection

    • Caroline König, René Alquézar, Alfredo Vellido, Jesús Giraldo
    Pages 89-96
  12. Geometric Approach to Biosequence Analysis

    • Boris Brimkov, Valentin E. Brimkov
    Pages 97-104
  13. Timed and Probabilistic Model Checking over Phylogenetic Trees

    • José Ignacio Requeno, José Manuel Colom
    Pages 105-112
  14. mBWA: A Massively Parallel Sequence Reads Aligner

    • Yingbo Cui, Xiangke Liao, Xiaoqian Zhu, Bingqiang Wang, Shaoliang Peng
    Pages 113-120
  15. Optimizing Multiple Pairwise Alignment of Genomic Sequences in Multicore Clusters

    • Alberto Montañola, Concepció Roig, Porfidio Hernández
    Pages 121-128
  16. High Performance Genomic Sequencing: A Filtered Approach

    • German Retamosa, Luis de Pedro, Ivan Gonzalez, Javier Tamames
    Pages 129-136
  17. Exceptional Single Strand DNA Word Symmetry: Universal Law?

    • Vera Afreixo, João M. O. S. Rodrigues, Carlos A. C. Bastos
    Pages 137-143
  18. Mutation Analysis in PARK2 Gene Uncovers Patterns of Associated Genetic Variants

    • Luísa Castro, José Luís Oliveira, Raquel M. Silva
    Pages 145-152
  19. Heterogeneous Parallelization of Aho-Corasick Algorithm

    • Shima Soroushnia, Masoud Daneshtalab, Juha Plosila, Pasi Liljeberg
    Pages 153-160

About this book

Biological and biomedical research are increasingly driven by experimental techniques that challenge our ability to analyse, process and extract meaningful knowledge from the underlying data. The impressive capabilities of next generation sequencing technologies, together with novel and ever evolving distinct types of omics data technologies, have put an increasingly complex set of challenges for the growing fields of Bioinformatics and Computational Biology. The analysis of the datasets produced and their integration call for new algorithms and approaches from fields such as Databases, Statistics, Data Mining, Machine Learning, Optimization, Computer Science and Artificial Intelligence. Clearly, Biology is more and more a science of information requiring tools from the computational sciences. In the last few years, we have seen the surge of a new generation of interdisciplinary scientists that have a strong background in the biological and computational sciences. In this context, the interaction of researchers from different scientific fields is, more than ever, of foremost importance boosting the research efforts in the field and contributing to the education of a new generation of Bioinformatics scientists. PACBB‘14 contributes to this effort promoting this fruitful interaction. PACBB'14 technical program included 34 papers spanning many different sub-fields in Bioinformatics and Computational Biology. Therefore, the conference promotes the interaction of scientists from diverse research groups and with a distinct background such as computer scientists, mathematicians or biologists.

Editors and Affiliations

  • EMBL Outstation - Hinxton, European Bioinformatics Institute, Hinxton, United Kingdom

    Julio Saez-Rodriguez

  • Department of Informatics, University of Minho, Braga, Portugal

    Miguel P. Rocha

  • Department of Informatics Campus Universitario As Lagoas s/n, University of Vigo, Ourense, Spain

    Florentino Fdez-Riverola

  • Department of Computing Science, University of Salamanca, Salamanca, Spain

    Juan F. De Paz Santana

Bibliographic Information

  • Book Title: 8th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB 2014)

  • Editors: Julio Saez-Rodriguez, Miguel P. Rocha, Florentino Fdez-Riverola, Juan F. De Paz Santana

  • Series Title: Advances in Intelligent Systems and Computing

  • DOI: https://doi.org/10.1007/978-3-319-07581-5

  • Publisher: Springer Cham

  • eBook Packages: Engineering, Engineering (R0)

  • Copyright Information: Springer International Publishing Switzerland 2014

  • Softcover ISBN: 978-3-319-07580-8Published: 16 June 2014

  • eBook ISBN: 978-3-319-07581-5Published: 21 May 2014

  • Series ISSN: 2194-5357

  • Series E-ISSN: 2194-5365

  • Edition Number: 1

  • Number of Pages: XIV, 294

  • Number of Illustrations: 66 b/w illustrations, 35 illustrations in colour

  • Topics: Computational Intelligence, Artificial Intelligence, Computational Biology/Bioinformatics

Buy it now

Buying options

eBook USD 129.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access