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  • © 2011

Argonaute Proteins

Methods and Protocols

  • Aids researchers in examining these versatile proteins in a wide variety of cell types
  • Features practical, step-by-step protocols which open the door to future progress in the field of molecular therapeutics
  • Contains expert tips and vital implementation advice to ensure success

Part of the book series: Methods in Molecular Biology (MIMB, volume 725)

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Table of contents (20 protocols)

  1. Front Matter

    Pages i-xi
  2. Chromatin Immunoprecipitation in Fission Yeast

    • Thomas A. Volpe, Jessica DeMaio
    Pages 15-28
  3. Biochemical Analyzes of Endogenous Argonaute Complexes Immunopurified with Anti-Argonaute Monoclonal Antibodies

    • Keita Miyoshi, Tomoko N. Okada, Haruhiko Siomi, Mikiko C. Siomi
    Pages 29-43
  4. Mapping of Ago2–GW182 Functional Interactions

    • Bing Yao, Songqing Li, Shang Li Lian, Marvin J. Fritzler, Edward K. L. Chan
    Pages 45-62
  5. In Vitro RISC Cleavage Assay

    • Julia Stoehr, Gunter Meister
    Pages 77-90
  6. Native Gel Analysis for RISC Assembly

    • Tomoko Kawamata, Yukihide Tomari
    Pages 91-105
  7. Detection of Human Dicer and Argonaute 2 Catalytic Activity

    • Marjorie P. Perron, Patricia Landry, Isabelle Plante, Patrick Provost
    Pages 121-141
  8. Imaging the Cellular Dynamics of Drosophila Argonaute Proteins

    • Jing Li, Nima Najand, Wendy Long, Andrew Simmonds
    Pages 143-159
  9. Live Cell Imaging of Argonaute Proteins in Mammalian Cells

    • Justin M. Pare, Joaquin Lopez-Orozco, Tom C. Hobman
    Pages 161-172
  10. Reporter-Based Assays for Analyzing RNA Interference in Mammalian Cells

    • Lydia V. McClure, Gil Ju Seo, Christopher S. Sullivan
    Pages 173-189
  11. Artificial Tethering of Argonaute Proteins for Studying their Role in Translational Repression of Target mRNAs

    • Stephanie Eckhardt, Emilia Szostak, Zhaolin Yang, Ramesh Pillai
    Pages 191-206
  12. An Efficient System for Let-7 MicroRNA and GW182 Protein-Mediated Deadenylation In Vitro

    • Marc R. Fabian, Yuri V. Svitkin, Nahum Sonenberg
    Pages 207-217
  13. Argonaute Pull-Down and RISC Analysis Using 2’-O-Methylated Oligonucleotides Affinity Matrices

    • Guillaume Jannot, Alejandro Vasquez-Rifo, Martin J. Simard
    Pages 233-249
  14. Cloning Argonaute-Associated Small RNAs from Caenorhabditis elegans

    • Weifeng Gu, Julie M. Claycomb, Pedro J. Batista, Craig C. Mello, Darryl Conte
    Pages 251-280
  15. Immunoprecipitation of piRNPs and Directional, Next Generation Sequencing of piRNAs

    • Yohei Kirino, Anastassios Vourekas, Eugene Khandros, Zissimos Mourelatos
    Pages 281-293

About this book

With the rapid proliferation of RNAi applications in basic and clinical sciences, the challenge has now become understanding how components of RNAi machinery function together in a regulated manner.  Argonaute proteins are the central effectors of RNAi and are highly conserved among eukaryotes and some archaebacteria. These RNA-binding proteins use small guide RNAs to silence expression of genes at the mRNA and DNA levels.  In Argonaute Proteins: Methods and Protocols, expert researchers in this burgeoning field provide detailed, up-to-date methods to study Argonaute protein functions and interactions in a wide variety of cell types ranging from yeast to mammalian systems, as well as in vitro.  Written in the highly successful Methods in Molecular Biology™ series format, chapters include brief introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls.

 

Practical and authoritative, Argonaute Proteins: Methods and Protocols serves as a vital reference for both experienced and novice scientists approaching the vast complexities of RNAi research.

Reviews

From the reviews:

“It can be fully appreciated the high quality of the book, the so well organized and sequentially logic presentation of the chapters. … giving a very update and detailed presentation of the entire Argonaute family members, their evolutionary conservation in Eukaryotes, mechanisms of  action, methods to study  in vitro and in vivo … . each biologist and physician, either involved in research or in clinical application will find irreplaceable this book. Hope the reader will get his own copy of this exciting book.” (Manuela Monti, European Journal of Histochemistry, July, 2011)

Editors and Affiliations

  • , Department of Cell Biology, University of Alberta, Edmonton, Canada

    Tom C. Hobman

  • Goodman Cancer Research Centre, Department of Biochemistry, McGill University, Montreal, Canada

    Thomas F. Duchaine

Bibliographic Information

  • Book Title: Argonaute Proteins

  • Book Subtitle: Methods and Protocols

  • Editors: Tom C. Hobman, Thomas F. Duchaine

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-61779-046-1

  • Publisher: Humana Totowa, NJ

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media, LLC 2011

  • Hardcover ISBN: 978-1-61779-045-4Published: 02 May 2011

  • Softcover ISBN: 978-1-4939-5827-6Published: 23 August 2016

  • eBook ISBN: 978-1-61779-046-1Published: 29 April 2011

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XII, 344

  • Topics: Protein Science, Genetic Engineering

Buy it now

Buying options

eBook USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 159.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access