Methods in Molecular Biology

Eukaryotic Genomic Databases

Methods and Protocols

Editors: Kollmar, Martin (Ed.)

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts
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eBook $119.00
price for USA in USD (gross)
  • ISBN 978-1-4939-7737-6
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Hardcover $159.00
price for USA in USD
  • ISBN 978-1-4939-7736-9
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About this book

This volume explores databases containing genome-based data and genome-wide analyses. This book covers databases from all eukaryotic taxa, except plants. The chapters describe database contents and classic use-cases, which assist in accessing eukaryotic genomic data and encouraging comparative genomic research. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, step-by-step, readily reproducible computational protocols, and tips on troubleshooting and avoiding known pitfalls.

Cutting-edge and authoritative, Eukaryotic Genomic Databases: Methods and Protocols is a valuable resource for geneticists and molecular biologists who are interested in the latest eukaryotic genomics data.

The chapters 'PomBase: The Scientific Resource for Fission Yeast' and 'The Ensembl Genome Browser: Strategies for Accessing Eukaryotic Genome Data' are available open access under a CC BY 4.0 license via link.springer.com.

Table of contents (18 chapters)

  • Identifying Sequenced Eukaryotic Genomes and Transcriptomes with diArk

    Kollmar, Martin (et al.)

    Pages 1-19

  • An Introduction to the Saccharomyces Genome Database (SGD)

    Lang, Olivia W. (et al.)

    Pages 21-30

  • Using the Candida Genome Database

    Skrzypek, Marek S. (et al.)

    Pages 31-47

  • PomBase: The Scientific Resource for Fission Yeast

    Lock, Antonia (et al.)

    Pages 49-68

  • EuPathDB: The Eukaryotic Pathogen Genomics Database Resource

    Warrenfeltz, Susanne (et al.)

    Pages 69-113

Buy this book

eBook $119.00
price for USA in USD (gross)
  • ISBN 978-1-4939-7737-6
  • Digitally watermarked, DRM-free
  • Included format: EPUB, PDF
  • ebooks can be used on all reading devices
  • Immediate eBook download after purchase
Hardcover $159.00
price for USA in USD
  • ISBN 978-1-4939-7736-9
  • Free shipping for individuals worldwide
  • Usually dispatched within 3 to 5 business days.
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Bibliographic Information

Bibliographic Information
Book Title
Eukaryotic Genomic Databases
Book Subtitle
Methods and Protocols
Editors
  • Martin Kollmar
Series Title
Methods in Molecular Biology
Series Volume
1757
Copyright
2018
Publisher
Humana Press
Copyright Holder
Springer Science+Business Media, LLC, part of Springer Nature
eBook ISBN
978-1-4939-7737-6
DOI
10.1007/978-1-4939-7737-6
Hardcover ISBN
978-1-4939-7736-9
Series ISSN
1064-3745
Edition Number
1
Number of Pages
XVI, 581
Number of Illustrations and Tables
2 b/w illustrations, 257 illustrations in colour
Topics