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Advances in Systems Biology

  • Conference proceedings
  • © 2012

Overview

Editors:
  1. Igor I. Goryanin

    1. School of Informatics, University of Edinburgh, Edinburgh, UK

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    You can also search for this editor in PubMed   Google Scholar

  2. Andrew B. Goryachev

    1. School of Biological Sciences, University of Edinburgh, Edinburgh, UK

    View editor publications

    You can also search for this editor in PubMed   Google Scholar

  • Part of the AEMB series
  • This volume covers the proceedings of the 11th International Conference on Systems Biology
  • The conference is designed to bring together a broad spectrum of professionals involved in disciplines such as biology medicine, mathematics, computer science, engineering, physics and chemistry
  • Includes supplementary material: sn.pub/extras

Part of the book series: Advances in Experimental Medicine and Biology (AEMB, volume 736)

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Table of contents (39 papers)

  1. Front Matter

    Pages i-xxii
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  2. Multiscale Biological Networks: Identification, Modeling and Analysis

    1. Front Matter

      Pages 1-1
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    2. Modular Analysis of Biological Networks

      • Hans-Michael Kaltenbach, Jörg Stelling
      Pages 3-17

    3. Modeling Signaling Networks Using High-throughput Phospho-proteomics

      • Camille Terfve, Julio Saez-Rodriguez
      Pages 19-57

    4. An Integrated Bayesian Framework for Identifying Phosphorylation Networks in Stimulated Cells

      • Tapesh Santra, Boris Kholodenko, Walter Kolch
      Pages 59-80

    5. Signaling Cascades: Consequences of Varying Substrate and Phosphatase Levels

      • Elisenda Feliu, Michael Knudsen, Carsten Wiuf
      Pages 81-94

    6. Heterogeneous Biological Network Visualization System: Case Study in Context of Medical Image Data

      • Erno Lindfors, Jussi Mattila, Peddinti V. Gopalacharyulu, Antti Pesonen, Jyrki Lötjönen, Matej Orešič
      Pages 95-118

    7. Evolution of the Cognitive Proteome: From Static to Dynamic Network Models

      • J. Douglas Armstrong, Oksana Sorokina
      Pages 119-134

    8. Molecular Systems Biology of Sic1 in Yeast Cell Cycle Regulation Through Multiscale Modeling

      • Matteo Barberis
      Pages 135-167

    9. Proteome-Wide Screens in Saccharomyces cerevisiae Using the Yeast GFP Collection

      • Yolanda T. Chong, Michael J. Cox, Brenda Andrews
      Pages 169-178

    10. Unraveling the Complex Regulatory Relationships Between Metabolism and Signal Transduction in Cancer

      • Michelle L. Wynn, Sofia D. Merajver, Santiago Schnell
      Pages 179-189

  3. Cellular Decision Making: Adaptation, Differentiation and Death

    1. Front Matter

      Pages 191-191
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    2. The Cell as a Thermostat: How Much does it Know?

      • Dennis Bray
      Pages 193-198

    3. Stem Cell Differentiation as a Renewal-Reward Process: Predictions and Validation in the Colonic Crypt

      • Kiran Gireesan Vanaja, Andrew P. Feinberg, Andre Levchenko
      Pages 199-209

    4. A Dynamic Physical Model of Cell Migration, Differentiation and Apoptosis in Caenorhabditis elegans

      • Antje Beyer, Ralf Eberhard, Nir Piterman, Michael O. Hengartner, Alex Hajnal, Jasmin Fisher
      Pages 211-233

    5. A Modular Model of the Apoptosis Machinery

      • E. O. Kutumova, I. N. Kiselev, R. N. Sharipov, I. N. Lavrik, Fedor A. Kolpakov
      Pages 235-245

    6. An Ensemble Approach for Inferring Semi-quantitative Regulatory Dynamics for the Differentiation of Mouse Embryonic Stem Cells Using Prior Knowledge

      • Dominik Lutter, Philipp Bruns, Fabian J. Theis
      Pages 247-260

    7. Cell Death and Life in Cancer: Mathematical Modeling of Cell Fate Decisions

      • Andrei Zinovyev, Simon Fourquet, Laurent Tournier, Laurence Calzone, Emmanuel Barillot
      Pages 261-274

    8. Theoretical Aspects of Cellular Decision-Making and Information-Processing

      • Tetsuya J. Kobayashi, Atsushi Kamimura
      Pages 275-291

    9. Zooming in on Yeast Osmoadaptation

      • Clemens Kühn, Edda Klipp
      Pages 293-310
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Keywords

About this book

The International Society for Systems Biology (ISSB) is a society aimed at advancing world-wide systems biology research by providing a forum for scientific discussions and various academic services. The ISSB helps coordinate researchers to form alliances for meeting the unique needs of multidisciplinary and international systems biology research. The annual International Conference on Systems Biology (ICSB) serves as the main meeting for the society and is one of the largest academic and commercial gatherings under the broad heading of ‘Systems Biology’.

Editors and Affiliations

  • School of Informatics, University of Edinburgh, Edinburgh, UK

    Igor I. Goryanin

  • School of Biological Sciences, University of Edinburgh, Edinburgh, UK

    Andrew B. Goryachev

Bibliographic Information

  • Book Title: Advances in Systems Biology

  • Editors: Igor I. Goryanin, Andrew B. Goryachev

  • Series Title: Advances in Experimental Medicine and Biology

  • DOI: https://doi.org/10.1007/978-1-4419-7210-1

  • Publisher: Springer New York, NY

  • eBook Packages: Biomedical and Life Sciences, Biomedical and Life Sciences (R0)

  • Copyright Information: The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature 2012

  • Hardcover ISBN: 978-1-4419-7209-5Published: 08 December 2011

  • Softcover ISBN: 978-1-4939-5138-3Published: 23 August 2016

  • eBook ISBN: 978-1-4419-7210-1Published: 09 December 2011

  • Series ISSN: 0065-2598

  • Series E-ISSN: 2214-8019

  • Edition Number: 1

  • Number of Pages: XXII, 682

  • Topics: Systems Biology, Bioinformatics, Biomedicine, general

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