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Medicine - Internal Medicine | Gut Pathogens

Gut Pathogens

Gut Pathogens

Editor-in-Chief: Niyaz Ahmed
Founding Editor: Leonardo A Sechi

ISSN: 1757-4749 (electronic version)

Journal no. 13099

BioMed Central

Open access BioMed Central
Learn more about the metrics of this journal
  • Official journal of International Society for Genomic and Evolutionary Microbiology (ISOGEM)
  • Average time to first decision under 22 days
  • Accepts Genome Report articles

Uniquely positioned within its field, Gut Pathogens encompasses the full breadth of research into the biology and medicine of pathogens, commensals and functional microbiota of the gut, including probiotic bacteria and yeasts and their products. Committed to the rapid dissemination of research, we cover topics ranging from the microbial etiology of gut ailments, to treatment and drug resistance mechanisms, and encourage the submission of timely reports on novel aspects of genomics, metagenomics, microbiota profiling, and systems biology.

Related subjects » Internal Medicine - Medical Microbiology

Impact Factor: 2.809 (2017) * 

Journal Citation Reports®

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Science Citation Index Expanded (SciSearch), Journal Citation Reports/Science Edition, PubMedCentral, SCOPUS, Chemical Abstracts Service (CAS), Google Scholar, BIOSIS, DOAJ, EBSCO Academic Search, EBSCO Biomedical Reference Collection, EBSCO Discovery Service, EBSCO STM Source, EBSCO TOC Premier, EMCare, Expanded Academic, OCLC WorldCat Discovery Service, ProQuest-ExLibris Primo, ProQuest-ExLibris Summon

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For authors and editors

  • Journal Citation Reports®
    2017 Impact Factor
  • 2.809
  • Aims and Scope

    Aims and Scope


    Gut Pathogens, the official journal of The International Society for Genomic and Evolutionary Microbiology (ISOGEM), is an open access, peer-reviewed online journal.

    Gut Pathogens is a fast publishing, inclusive and prominent international journal which recognizes the need for a publishing platform uniquely tailored to reflect the full breadth of research in the biology and medicine of pathogens, commensals and functional microbiota of the gut. The journal publishes basic, clinical and cutting-edge research on all aspects of the above mentioned organisms including probiotic bacteria and yeasts and their products. The scope also covers the related ecology, molecular genetics, physiology and epidemiology of these microbes. The journal actively invites timely reports on the novel aspects of genomics, metagenomics, microbiota profiling and systems biology.

    Gut Pathogens will also consider, at the discretion of the editors, descriptive studies identifying a new genome sequence of a gut microbe or a series of related microbes (such as those obtained from new hosts, niches, settings, outbreaks and epidemics) and those obtained from single or multiple hosts at one or different time points (chronological evolution).

    Short articles that briefly and concisely describe the isolation and characterization of new pathogenic species or variants thereof, or a new strain or type based on sequence analysis or association studies of host and pathogen genetic repertoires or polymorphisms (functional molecular infection epidemiology) are also welcome.

    Topical areas include, but are not limited to:

    • Microbial etiology of gut ailments
    • Gut invasion mechanisms
    • Microbial toxins and virulence factors in infections of the gut and associated glands - liver, pancreas
    • Bacterial adaptation to gut niches and evolution of pathogenicity
    • Biology and ecology of gut commensals and microbiota in health and disease
    • Biology and ecology of probiotic organisms
    • Host susceptibility or resistance to gut pathogens
    • Immune mechanisms of gut infections
    • Etiology of inflammatory bowel diseases
    • Molecular and serological diagnosis
    • Treatment and drug resistance mechanisms
    • Molecular epidemiology, transmission dynamics and evolutionary genetics
    • Vaccines for gut pathogens
    • Comparative and veterinary infectious diseases of the gut
    • Pathogenesis of bacterial, parasitic and viral infections of the gut
    • Genome sequencing, comparative genomics and systems biology
    • Microbiota analysis, metagenomics and gut microbiomes
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