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DNA Computing and Molecular Programming

18th International Conference, DNA 18, Aarhus, Denmark, August 14-17, 2012, Proceedings

  • Conference proceedings
  • © 2012

Overview

Editors:
  1. Darko Stefanovic

    1. Department of Computer Science, University of New Mexico, Albuquerque, USA

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  2. Andrew Turberfield

    1. Department of Physics, Clarendon Laboratory, University of Oxford, Oxford, UK

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 7433)

Part of the book sub series: Theoretical Computer Science and General Issues (LNTCS)

Included in the following conference series:

Conference proceedings info: DNA 2012.

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Table of contents (11 papers)

  1. Front Matter

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  2. Turing Universality of Step-Wise and Stage Assembly at Temperature 1

    • Bahar Behsaz, Ján Maňuch, Ladislav Stacho
    Pages 1-11

  3. A Type System for DNAQL

    • Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche
    Pages 12-24

  4. Deterministic Function Computation with Chemical Reaction Networks

    • Ho-Lin Chen, David Doty, David Soloveichik
    Pages 25-42

  5. Reachability Bounds for Chemical Reaction Networks and Strand Displacement Systems

    • Anne Condon, Bonnie Kirkpatrick, Ján Maňuch
    Pages 43-57

  6. Synthesizing Minimal Tile Sets for Complex Patterns in the Framework of Patterned DNA Self-Assembly

    • Eugen Czeizler, Alexandru Popa
    Pages 58-72

  7. A Geometric Approach to Gibbs Energy Landscapes and Optimal DNA Codeword Design

    • Max H. Garzon, Kiran C. Bobba
    Pages 73-85

  8. A DNA Based Molecular Logic Gate Capable of a Variety of Logical Operations

    • Anton Kan, Koh-ichiroh Shohda, Akira Suyama
    Pages 86-97

  9. Deciding Whether a Regular Language Is Generated by a Splicing System

    • Lila Kari, Steffen Kopecki
    Pages 98-109

  10. Probabilistic Reasoning with a Bayesian DNA Device Based on Strand Displacement

    • Iñaki Sainz de Murieta, Alfonso Rodríguez-Patón
    Pages 110-122

  11. DNA Self-Assembly and Computation Studied with a Coarse-Grained Dynamic Bonded Model

    • Carsten Svaneborg, Harold Fellermann, Steen Rasmussen
    Pages 123-134

  12. Space and Energy Efficient Computation with DNA Strand Displacement Systems

    • Chris Thachuk, Anne Condon
    Pages 135-149

  13. Back Matter

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Other volumes

  1. DNA Computing and Molecular Programming

Keywords

About this book

This book constitutes the refereed proceedings of the 18th International Conference on DNA Computing and Molecular Programming, DNA 18, held in Aarhus, Denmark, in August 2012. The 11 full papers presented were carefully selected from 37 submissions. The papers are organized in topical sections on advancing the engineering and science of biology and chemistry from the point of view of computer science, physics, and mathematics.

Editors and Affiliations

  • Department of Computer Science, University of New Mexico, Albuquerque, USA

    Darko Stefanovic

  • Department of Physics, Clarendon Laboratory, University of Oxford, Oxford, UK

    Andrew Turberfield

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