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Regulatory Genomics

RECOMB 2004 International Workshop, RRG 2004, San Diego, CA, USA, March 26-27, 2004, Revised Selected Papers

  • Conference proceedings
  • © 2005
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Overview

Editors:
  1. Eleazar Eskin

    1. Department of Human Genetics, University of California Los Angeles, Los Angeles

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    You can also search for this editor in PubMed   Google Scholar

  2. Christopher Workman

    1. Department of Bioengineering, University of California, San Diego, USA

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    You can also search for this editor in PubMed   Google Scholar

Part of the book series: Lecture Notes in Computer Science (LNCS, volume 3318)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Included in the following conference series:

Conference proceedings info: RRG 2004.

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Table of contents (10 papers)

  1. Front Matter

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  2. Predicting Genetic Regulatory Response Using Classification: Yeast Stress Response

    • Manuel Middendorf, Anshul Kundaje, Chris Wiggins, Yoav Freund, Christina Leslie
    Pages 1-13
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  3. Detecting Functional Modules of Transcription Factor Binding Sites in the Human Genome

    • Thomas Manke, Christoph Dieterich, Martin Vingron
    Pages 14-21
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  4. Fishing for Proteins in the Pacific Northwest

    • William Krivan
    Pages 22-29
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  5. PhyloGibbs: A Gibbs Sampler Incorporating Phylogenetic Information

    • Rahul Siddharthan, Erik van Nimwegen, Eric D. Siggia
    Pages 30-41
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  6. Application of Kernel Method to Reveal Subtypes of TF Binding Motifs

    • Alexander Kel, Yury Tikunov, Nico Voss, Jürgen Borlak, Edgar Wingender
    Pages 42-51
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  7. Learning Regulatory Network Models that Represent Regulator States and Roles

    • Keith Noto, Mark Craven
    Pages 52-64
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  8. Using Expression Data to Discover RNA and DNA Regulatory Sequence Motifs

    • Chaya Ben-Zaken Zilberstein, Eleazar Eskin, Zohar Yakhini
    Pages 65-78
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  9. Parameter Landscape Analysis for Common Motif Discovery Programs

    • Natalia Polouliakh, Michiko Konno, Paul Horton, Kenta Nakai
    Pages 79-87
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  10. Inferring Cis-region Hierarchies from Patterns in Time-Course Gene Expression Data

    • Vladimir Filkov, Nameeta Shah
    Pages 88-97
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  11. Modeling and Analysis of Heterogeneous Regulation in Biological Networks

    • Irit Gat-Viks, Amos Tanay, Ron Shamir
    Pages 98-113
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  12. Back Matter

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  1. Regulatory Genomics

Keywords

Editors and Affiliations

  • Department of Human Genetics, University of California Los Angeles, Los Angeles

    Eleazar Eskin

  • Department of Bioengineering, University of California, San Diego, USA

    Christopher Workman

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