RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods
Editors: Gorodkin, Jan, Ruzzo, Walter L. (Eds.)
Free Preview- Presents current up-to-date methodologies
- Features tips on trouble shooting and avoiding known pitfalls
- Contains key notes and implementation advice from the experts
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- About this book
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The existence of genes for RNA molecules not coding for proteins (ncRNAs) has been recognized since the 1950's, but until recently, aside from the critically important ribosomal and transfer RNA genes, most focus has been on protein coding genes. However, a long series of striking discoveries, from RNA's ability to carry out catalytic function, to discovery of riboswitches, microRNAs and other ribo-regulators performing critical tasks in essentially all living organisms, has created a burgeoning interest in this primordial component of the biosphere. However, the structural characteristics and evolutionary constraints on RNA molecules are very different from those of proteins, necessitating development of a completely new suite of informatic tools to address these challenges. In RNA Sequence, Structure, Function: Computational and Bioinformatic Methods, expert researchers in the field describe a substantial and relevant fraction of these methodologies from both practical and computational/algorithmic perspectives. Focusing on both of these directions addresses both the biologist interested in knowing more about RNA bioinformatics as well as the bioinformaticist interested in more detailed aspects of the algorithms. Written in the highly successful Methods in Molecular Biology series format, the chapters include the kind of detailed description and implementation advice that is crucial for getting optimal results.
Thorough and intuitive, RNA Sequence, Structure, Function: Computational and Bioinformatic Methods aids scientists in continuing to study key methods and principles of RNA bioinformatics.
- Reviews
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From the book reviews:
“This book on RNA structure and function is suitable for both graduate and post-graduate students as well as established researchers. … the book is also a valuable review of the state of the art of hot topics on cutting edge directions of research. In addition, the value of each chapter is enriched by an extensive set of references of recent yet established papers, offering a reliable starting point for literature on each research topic.” (Irina Ioana Mohorianu, zbMATH 1307.92008, 2015)
- Table of contents (23 chapters)
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Concepts and Introduction to RNA Bioinformatics
Pages 1-31
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The Principles of RNA Structure Architecture
Pages 33-43
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The Determination of RNA Folding Nearest Neighbor Parameters
Pages 45-70
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Energy-Directed RNA Structure Prediction
Pages 71-84
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Introduction to Stochastic Context Free Grammars
Pages 85-106
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Table of contents (23 chapters)
- Download Preface 1 PDF (36.1 KB)
- Download Sample pages 1 PDF (400.3 KB)
- Download Table of contents PDF (38.7 KB)
Bibliographic Information
- Bibliographic Information
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- Book Title
- RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods
- Editors
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- Jan Gorodkin
- Walter L. Ruzzo
- Series Title
- Methods in Molecular Biology
- Series Volume
- 1097
- Copyright
- 2014
- Publisher
- Humana Press
- Copyright Holder
- Springer Science+Business Media New York
- Distribution Rights
- Distribution rights for India: Researchco Book Centre, New Delhi, India
- eBook ISBN
- 978-1-62703-709-9
- DOI
- 10.1007/978-1-62703-709-9
- Hardcover ISBN
- 978-1-62703-708-2
- Softcover ISBN
- 978-1-4939-6165-8
- Series ISSN
- 1064-3745
- Edition Number
- 1
- Number of Pages
- XI, 533
- Number of Illustrations
- 74 b/w illustrations, 46 illustrations in colour
- Topics
