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Comparative Genomics

21st International Conference, RECOMB-CG 2024, Boston, MA, USA, April 27–28, 2024, Proceedings

  • Conference proceedings
  • © 2024

Overview

Editors:
  1. Celine Scornavacca

    1. CNRS, University of Montpellier, Montpellier, France

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    You can also search for this editor in PubMed   Google Scholar

  2. Maribel Hernández-Rosales

    1. Center for Research and Advanced Studies, Irapuato, Mexico

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    You can also search for this editor in PubMed   Google Scholar

Part of the book series: Lecture Notes in Computer Science (LNCS, volume 14616)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Included in the following conference series:

Conference proceedings info: RECOMB-CG 2024.

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Table of contents (13 papers)

  1. Front Matter

    Pages i-xii
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  2. Phylogenetic Networks

    1. Front Matter

      Pages 1-1
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    2. Statistically Consistent Estimation of Rooted and Unrooted Level-1 Phylogenetic Networks from SNP Data

      • Tandy Warnow, Yasamin Tabatabaee, Steven N. Evans
      Pages 3-23

    3. Galled Perfect Transfer Networks

      • Alitzel López Sánchez, Manuel Lafond
      Pages 24-43

  3. Homology and Phylogenetic Reconstruction

    1. Front Matter

      Pages 45-45
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    2. Inferring Transcript Phylogenies from Transcript Ortholog Clusters

      • Wend Yam D. D. Ouedraogo, Aida Ouangraoua
      Pages 47-68

    3. Gene-Adjacency-Based Phylogenetics Under a Stochastic Gain-Loss Model

      • Yoav Dvir, Shelly Brezner, Sagi Snir
      Pages 69-85

  4. Tools for Evolution Reconstruction

    1. Front Matter

      Pages 87-87
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    2. REvolutionH-tl: Reconstruction of Evolutionary Histories tool

      • José Antonio Ramírez-Rafael, Annachiara Korchmaros, Katia Aviña-Padilla, Alitzel López Sánchez, Andrea Arlette España-Tinajero, Marc Hellmuth et al.
      Pages 89-109

    3. Gene Tree Parsimony in the Presence of Gene Duplication, Loss, and Incomplete Lineage Sorting

      • Prottoy Saha, Md. Shamiul Islam, Tasnim Rahman, Adiba Shaira, Kazi Noshin, Rezwana Reaz et al.
      Pages 110-128

    4. Assessing the Potential of Gene Tree Parsimony for Microbial Phylogenomics

      • Samson Weiner, Yutian Feng, J. Peter Gogarten, Mukul S. Bansal
      Pages 129-149

  5. Genome Rearrangements

    1. Front Matter

      Pages 151-151
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    2. Maximum Alternating Balanced Cycle Decomposition and Applications in Sorting by Intergenic Operations Problems

      • Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Gabriel Siqueira, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
      Pages 153-172

    3. On the Distribution of Synteny Blocks Under a Neutral Model of Genome Dynamics

      • Sagi Snir, Yuri Wolf, Shelly Brezner, Eugene Koonin, Mike Steel
      Pages 173-188

    4. Sampling Gene Adjacencies and Geodesic Points of Random Genomes

      • Poly H. da Silva, Arash Jamshidpey, David Sankoff
      Pages 189-210

  6. Genome Evolution

    1. Front Matter

      Pages 211-211
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    2. Transcription Factors Across the Escherichia coli Pangenome: A 3D Perspective

      • Gabriel Moreno-Hagelsieb
      Pages 213-225

    3. Revisiting the Effects of MDR1 Variants Using Computational Approaches

      • Tal Gutman, Tamir Tuller
      Pages 226-247

    4. Evidence of Increased Adaptation of Omicron SARS-CoV-2 Codons to Humans

      • Alma Davidson, Marina Parr, Franziska Totzeck, Alexander Churkin, Danny Barash, Dmitrij Frishman et al.
      Pages 248-270

  7. Back Matter

    Pages 271-272
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Other volumes

  1. Comparative Genomics

Keywords

About this book

This book constitutes the proceedings of the 21st International Conference on Comparative Genomics, RECOMB-CG 2024, which was held in Boston, MA, USA, during April 27–28, 2024.

The 13 full papers presented in this book were carefully reviewed and selected from 21 submissions. The papers are divided into the following topical sections: phylogenetic networks; homology and phylogenetic reconstruction; tools for evolution reconstruction; genome rearrangements; and genome evolution.

 

 

Editors and Affiliations

  • CNRS, University of Montpellier, Montpellier, France

    Celine Scornavacca

  • Center for Research and Advanced Studies, Irapuato, Mexico

    Maribel Hernández-Rosales

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