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Bioinformatics Research and Applications

18th International Symposium, ISBRA 2022, Haifa, Israel, November 14–17, 2022, Proceedings

  • Conference proceedings
  • © 2022

Overview

Editors:
  1. Mukul S. Bansal

    1. University of Connecticut, Storrs, USA

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  2. Zhipeng Cai

    1. Georgia State University, Atlanta, USA

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  3. Serghei Mangul

    1. University of Southern California, Los Angeles, USA

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 13760)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Included in the following conference series:

Conference proceedings info: ISBRA 2022.

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Table of contents (35 papers)

  1. Front Matter

    Pages i-xiv
    Download chapter PDF

  2. MLMVFE: A Machine Learning Approach Based on Muli-view Features Extraction for Drug-Disease Associations Prediction

    • Ying Wang, Ying-Lian Gao, Juan Wang, Junliang Shang, Jin-Xing Liu
    Pages 1-8

  3. STgcor: A Distribution-Based Correlation Measurement Method for Spatial Transcriptome Data

    • Xiaoshu Zhu, Liyuan Pang, Wei Lan, Shuang Meng, Xiaoqing Peng
    Pages 9-18

  4. Automatic ICD Coding Based on Multi-granularity Feature Fusion

    • Ying Yu, Junwen Duan, Han Jiang, Jianxin Wang
    Pages 19-29

  5. Effectively Training MRI Reconstruction Network via Sequentially Using Undersampled k-Space Data with Very Low Frequency Gaps

    • Tian-Yi Xing, Xiao-Xin Li, Zhi-Jie Chen, Xi-Yu Zheng, Fan Zhang
    Pages 30-40

  6. Fusing Label Relations for Chinese EMR Named Entity Recognition with Machine Reading Comprehension

    • Shuyue Liu, Junwen Duan, Feng Gong, Hailin Yue, Jianxin Wang
    Pages 41-51

  7. Private Epigenetic PaceMaker Detector Using Homomorphic Encryption - Extended Abstract

    • Meir Goldenberg, Sagi Snir, Adi Akavia
    Pages 52-61

  8. NIDN: Medical Code Assignment via Note-Code Interaction Denoising Network

    • Xiaobo Li, Yijia Zhang, Xingwang Li, Jian Wang, Mingyu Lu
    Pages 62-74

  9. Research on the Prediction Method of Disease Classification Based on Imaging Features

    • Yu Sheng, Shengyi Yang, Huirong Hu, Guihua Duan
    Pages 75-87

  10. M-US-EMRs: A Multi-modal Data Fusion Method of Ultrasonic Images and Electronic Medical Records Used for Screening of Coronary Heart Disease

    • Bokai Yang, Yingnan Zuo, Shunxiang Yang, Genqiang Deng, Suisong Zhu, Yunpeng Cai
    Pages 88-99

  11. Transposition Distance Considering Intergenic Regions for Unbalanced Genomes

    • Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Ulisses Dias, Zanoni Dias
    Pages 100-113

  12. An SMT-Based Framework for Reasoning About Discrete Biological Models

    • Boyan Yordanov, Sara-Jane Dunn, Colin Gravill, Hillel Kugler, Christoph M. Wintersteiger
    Pages 114-125

  13. ARGLRR: An Adjusted Random Walk Graph Regularization Sparse Low-Rank Representation Method for Single-Cell RNA-Sequencing Data Clustering

    • Zhen-Chang Wang, Jin-Xing Liu, Jun-Liang Shang, Ling-Yun Dai, Chun-Hou Zheng, Juan Wang
    Pages 126-137

  14. An Efficient and User-Friendly Software for PCR Primer Design for Detection of Highly Variable Bacteria

    • Dongzheng Hu, Wubin Qu, Fan Tong, Xiangwen Zheng, Jiangyu Li, Dongsheng Zhao
    Pages 138-147

  15. A Network-Based Voting Method for Identification and Prioritization of Personalized Cancer Driver Genes

    • Han Li, Feng Li, Junliang Shang, Xikui Liu, Yan Li
    Pages 148-158

  16. TDCOSR: A Multimodality Fusion Framework for Association Analysis Between Genes and ROIs of Alzheimer’s Disease

    • Qi Zou, Yan Sun, Feng Li, Juan Wang, Jin-Xing Liu, Junliang Shang
    Pages 159-168

  17. Policy-Based Hypertension Monitoring Using Formal Runtime Verification Monitors

    • Abhinandan Panda, Srinivas Pinisetty, Partha Roop
    Pages 169-179

  18. Deep Learning-Enhanced MHC-II Presentation Prediction and Peptidome Deconvolution

    • Juntao Deng, Min Liu
    Pages 180-191

  19. MMLN: Leveraging Domain Knowledge for Multimodal Diagnosis

    • Haodi Zhang, Chenyu Xu, Peirou Liang, Ke Duan, Hao Ren, Weibin Cheng et al.
    Pages 192-203

  20. Optimal Sequence Alignment to ED-Strings

    • Njagi Moses Mwaniki, Nadia Pisanti
    Pages 204-216
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  1. Bioinformatics Research and Applications

Keywords

About this book

This book constitutes the proceedings of the 18th International Symposium on Bioinformatics Research and Applications, ISBRA 2022, held in Haifa, Israel, in November 14–17, 2022.

The 30 full papers and 4 short papers presented in this book were carefully reviewed and selected from 72 submissions. They were organized in topical sections named: AI and disease; computational proteomics; biomedical imaging; drug screening and drug-drug interaction prediction; Biomedical data; sequencing data analysis.


Editors and Affiliations

  • University of Connecticut, Storrs, USA

    Mukul S. Bansal

  • Georgia State University, Atlanta, USA

    Zhipeng Cai

  • University of Southern California, Los Angeles, USA

    Serghei Mangul

Bibliographic Information

  • Book Title: Bioinformatics Research and Applications

  • Book Subtitle: 18th International Symposium, ISBRA 2022, Haifa, Israel, November 14–17, 2022, Proceedings

  • Editors: Mukul S. Bansal, Zhipeng Cai, Serghei Mangul

  • Series Title: Lecture Notes in Computer Science

  • DOI: https://doi.org/10.1007/978-3-031-23198-8

  • Publisher: Springer Cham

  • eBook Packages: Computer Science, Computer Science (R0)

  • Copyright Information: The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Nature Switzerland AG 2022

  • Softcover ISBN: 978-3-031-23197-1Published: 02 January 2023

  • eBook ISBN: 978-3-031-23198-8Published: 01 January 2023

  • Series ISSN: 0302-9743

  • Series E-ISSN: 1611-3349

  • Edition Number: 1

  • Number of Pages: XIV, 390

  • Number of Illustrations: 18 b/w illustrations, 108 illustrations in colour

  • Topics: Bioinformatics, Artificial Intelligence, Computer Communication Networks, Information Systems and Communication Service

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