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Circadian Clocks

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  • © 2022

Overview

Editors:
  1. Tsuyoshi Hirota

    1. Institute of Transformative Bio-Molecules, Nagoya University, Nagoya, Japan

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  2. Megumi Hatori

    1. Institute of Transformative Bio-Molecules, Nagoya University, Nagoya, Japan

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    You can also search for this editor in PubMed   Google Scholar

  3. Satchidananda Panda

    1. Regulatory Biology Laboratory, Salk Institute for Biological Studies, La Jolla, USA

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    You can also search for this editor in PubMed   Google Scholar

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts

Part of the book series: Neuromethods (NM, volume 186)

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Table of contents (19 protocols)

  1. Front Matter

    Pages i-xiii
    Download chapter PDF

  2. Circadian Rhythm Measurements in Humans

    • Ken-ichi Honma, Yujiro Yamanaka
    Pages 1-27

  3. Biological Rhythm Measurements in Rodents

    • Daan R. van der Veen, Menno P. Gerkema, Vincent van der Vinne
    Pages 29-62

  4. Assaying Circadian Locomotor Activity Rhythm in Drosophila

    • Yao D. Cai, Sergio I. Hidalgo Sotelo, Kiya C. Jackson, Joanna C. Chiu
    Pages 63-83

  5. Neuroanatomy of the Suprachiasmatic Nucleus (SCN): Multicolor Immunohistochemistry and 3D Reconstruction

    • Jens Hannibal
    Pages 85-98

  6. Long-Term Imaging and Electrophysiology of Single Suprachiasmatic Nucleus Neurons

    • Karen J. Tonsfeldt, David K. Welsh
    Pages 99-120

  7. Patch-Clamp Electrophysiological Analysis of Murine Melanopsin Neurons

    • Michael Tri Hoang Do
    Pages 121-150

  8. Intrinsically Photosensitive Retinal Ganglion Cells: Assessment of Their Influence on Pupillary Responses in Primates

    • Paul D. Gamlin
    Pages 151-168

  9. Spectroscopic Analysis of Wavelength Sensitivities of Opsin-Type Photoreceptor Proteins

    • Daisuke Kojima, Yoshitaka Fukada
    Pages 169-185

  10. Nocturnal and Diurnal Behavior Assessed by the “Work-for-Food” Protocol in Small Rodents

    • Laura van Rosmalen, Sjaak J. Riede, Violetta Pilorz, Tiziana Adage, Anton J. W. Scheurink, Vincent van der Vinne et al.
    Pages 187-216

  11. Assessment of Circalunar (~Monthly) Rhythms

    • Birgit Poehn, Kristin Tessmar-Raible
    Pages 217-230

  12. Identification and Characterization of Genes Involved in Vertebrate Photoperiodism

    • Tomoya Nakayama, Kataaki Okubo, Satoshi Ansai, Takashi Yoshimura
    Pages 231-257

  13. Methods to Study Sleep in Zebrafish

    • Steven Tran, David A. Prober
    Pages 259-286

  14. Assessment of Sleep in Mice

    • Chijung Hung, Akihiro Yamanaka
    Pages 287-297

  15. Design Principles and Analysis Guidelines for Understanding Time-of-Day Effects in the Brain

    • Shaunak Deota, Hugo Calligaro, Satchidananda Panda
    Pages 299-316

  16. Proteomics Approaches to Assess Sleep and Circadian Rhythms

    • Fabian P. Kliem, Franziska Brüning, Maria S. Robles
    Pages 317-331

  17. A Primer for Circadian Metabolic Profile Analysis Using Multi-platform Metabolomics

    • Ai Wen Tan, Dania M. Malik, Lisa N. Bottalico, Arjun Sengupta, Aalim M. Weljie
    Pages 333-357

  18. Next-Generation Mice Genetics for Circadian Studies

    • Hideki Ukai, Koji L. Ode, Hiroki R. Ueda
    Pages 359-376

  19. Chronophotopharmacology: Methodology for High Spatiotemporal Control Over the Circadian Rhythm with Light

    • Dušan Kolarski, Wiktor Szymanski, Ben L. Feringa
    Pages 377-401

  20. Mathematical Modeling of Circadian Rhythms

    • Lindsey S. Brown, John H. Abel, Elizabeth B. Klerman, Francis J. Doyle III
    Pages 403-425
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Keywords

About this book

This volume provides backgrounds, methods, and troubleshooting for the analysis of circadian rhythms at the molecular, cellular, and organismal levels in vertebrates and invertebrates, and also covers light input, sleep, circalunar rhythms, and seasonal rhythms. The chapters in this book discuss behavioral and biological testing, histochemistry, single-cell imaging, electrophysiology, photochemistry, genetics, genomics, transcriptomics, proteomics, metabolomics, systems biology, chemical biology, and mathematical modeling. In the Neuromethods series style, chapters include experimental detail and key advice from the specialists needed to successfully carry out these methods in your laboratory. 

Cutting-edge and practical, Circadian Clocks is a valuable resource for all researchers seeking to learn about established and novel methods in chronobiology, and the molecular mechanisms of the rhythmic control of physiology and behavior. 

Editors and Affiliations

  • Institute of Transformative Bio-Molecules, Nagoya University, Nagoya, Japan

    Tsuyoshi Hirota, Megumi Hatori

  • Regulatory Biology Laboratory, Salk Institute for Biological Studies, La Jolla, USA

    Satchidananda Panda

Bibliographic Information

  • Book Title: Circadian Clocks

  • Editors: Tsuyoshi Hirota, Megumi Hatori, Satchidananda Panda

  • Series Title: Neuromethods

  • DOI: https://doi.org/10.1007/978-1-0716-2577-4

  • Publisher: Humana New York, NY

  • eBook Packages: Springer Protocols

  • Copyright Information: The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature 2022

  • Hardcover ISBN: 978-1-0716-2576-7Published: 16 September 2022

  • Softcover ISBN: 978-1-0716-2579-8Published: 17 September 2023

  • eBook ISBN: 978-1-0716-2577-4Published: 15 September 2022

  • Series ISSN: 0893-2336

  • Series E-ISSN: 1940-6045

  • Edition Number: 1

  • Number of Pages: XIII, 429

  • Number of Illustrations: 19 b/w illustrations, 78 illustrations in colour

  • Topics: Neurosciences

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