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  • © 2016

New Theory of Discriminant Analysis After R. Fisher

Advanced Research by the Feature Selection Method for Microarray Data

Authors:

  • Compares eight LDFs by seven different kinds of data sets from the points of view of M2 and 95% CI of the coefficient
  • Presents solutions for five serious problems of discriminant analysis and finds important facts of discriminant coefficient and error rate with a new method of discriminant analysis
  • Makes feature selection naturally and reveals the structure of the microarray data by the Matroska feature selection method

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Table of contents (9 chapters)

  1. Front Matter

    Pages i-xx
  2. New Theory of Discriminant Analysis

    • Shuichi Shinmura
    Pages 1-35
  3. Iris Data and Fisher’s Assumption

    • Shuichi Shinmura
    Pages 37-55
  4. Student Data and Problem 1

    • Shuichi Shinmura
    Pages 81-98
  5. Pass/Fail Determination Using Examination Scores

    • Shuichi Shinmura
    Pages 99-115
  6. Best Model for Swiss Banknote Data

    • Shuichi Shinmura
    Pages 117-138
  7. Japanese-Automobile Data

    • Shuichi Shinmura
    Pages 139-161
  8. LINGO Program 2 of Method 1

    • Shuichi Shinmura
    Pages 191-204
  9. Back Matter

    Pages 205-208

About this book

This is the first book to compare eight LDFs by different types of datasets, such as Fisher’s iris data, medical data with collinearities, Swiss banknote data that is a linearly separable data (LSD), student pass/fail determination using student attributes, 18 pass/fail determinations using exam scores, Japanese automobile data, and six microarray datasets (the datasets) that are LSD. We developed the 100-fold cross-validation for the small sample method (Method 1) instead of the LOO method. We proposed a simple model selection procedure to choose the best model having minimum M2 and Revised IP-OLDF based on MNM criterion was found to be better than other M2s in the above datasets.
We compared two statistical LDFs and six MP-based LDFs. Those were Fisher’s LDF, logistic regression, three SVMs, Revised IP-OLDF, and another two OLDFs. Only a hard-margin SVM (H-SVM) and Revised IP-OLDF could discriminate LSD theoretically (Problem 2). We solved the defect of the generalized inverse matrices (Problem 3).

For more than 10 years, many researchers have struggled to analyze the microarray dataset that is LSD (Problem 5). If we call the linearly separable model "Matroska," the dataset consists of numerous smaller Matroskas in it. We develop the Matroska feature selection method (Method 2). It finds the surprising structure of the dataset that is the disjoint union of several small Matroskas. Our theory and methods reveal new facts of gene analysis.


Authors and Affiliations

  • Faculty of Economics, Seikei University, Musashinoshi, Japan

    Shuichi Shinmura

About the author

Shuichi Shinmura, Seikei University

Bibliographic Information

Buy it now

Buying options

eBook USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access