Skip to main content
SpringerLink
Log in
Book cover
  • Conference proceedings
  • © 2010

Pattern Recognition in Bioinformatics

5th IAPR International Conference, PRIB 2010, Nijmegen, The Netherlands, September 22-24, 2010, Proceedings

Editors:

  1. Tjeerd M. H. Dijkstra

    1. Institute for Computing and Information Sciences, Radboud University Nijmegen, Nijmegen, The Netherlands

    View editor publications

    You can also search for this editor in PubMed   Google Scholar

  2. Evgeni Tsivtsivadze

    1. Institute for Computing and Information Sciences, Turku Centre for Computer Science, Radboud University Nijmegen, Nijmegen, The Netherlands

    View editor publications

    You can also search for this editor in PubMed   Google Scholar

  3. Elena Marchiori

    1. Institute for Computing and Information Sciences, Radboud University Nijmegen, Nijmegen, The Netherlands

    View editor publications

    You can also search for this editor in PubMed   Google Scholar

  4. Tom Heskes

    1. Institute for Computing and Information Sciences, Radboud University Nijmegen, Nijmegen, The Netherlands

    View editor publications

    You can also search for this editor in PubMed   Google Scholar

  • Fast track conference proceeding
  • Unique visibility
  • State of the art research

Part of the book series: Lecture Notes in Computer Science (LNCS, volume 6282)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Conference series link(s): PRIB: IAPR International Conference on Pattern Recognition in Bioinformatics

Conference proceedings info: PRIB 2010.

Sections

Buy it now

eBook USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access

This is a preview of subscription content, log in via an institution to check for access.

Table of contents (38 papers)

  1. Front Matter

    PDF

  2. Classification of Biological Sequences

    1. Front Matter

      Pages 1-1
      PDF

    2. Sequence-Based Prediction of Protein Secretion Success in Aspergillus niger

      • Bastiaan A. van den Berg, Jurgen F. Nijkamp, Marcel J. T. Reinders, Liang Wu, Herman J. Pel, Johannes A. Roubos et al.
      Pages 3-14

    5. Structured Output Prediction of Anti-cancer Drug Activity

      • Hongyu Su, Markus Heinonen, Juho Rousu
      Pages 38-49

    6. SLiMSearch: A Webserver for Finding Novel Occurrences of Short Linear Motifs in Proteins, Incorporating Sequence Context

      • Norman E. Davey, Niall J. Haslam, Denis C. Shields, Richard J. Edwards
      Pages 50-61

    7. Towards 3D Modeling of Interacting TM Helix Pairs Based on Classification of Helix Pair Sequence

      • Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska
      Pages 62-73

    8. Optimization Algorithms for Identification and Genotyping of Copy Number Polymorphisms in Human Populations

      • Gökhan YavaÅŸ, Mehmet Koyutürk, Thomas LaFramboise
      Pages 74-85

    10. Novel Machine Learning Methods for MHC Class I Binding Prediction

      • Christian Widmer, Nora C. Toussaint, Yasemin Altun, Oliver Kohlbacher, Gunnar Rätsch
      Pages 98-109

  3. Unsupervised Learning Methods for Biological Sequences

    1. Front Matter

      Pages 111-111
      PDF

    2. SIMCOMP: A Hybrid Soft Clustering of Metagenome Reads

      • Shruthi Prabhakara, Raj Acharya
      Pages 113-124

    3. The Complexity and Application of Syntactic Pattern Recognition Using Finite Inductive Strings

      • Elijah Myers, Paul S. Fisher, Keith Irwin, Jinsuk Baek, Joao Setubal
      Pages 125-136

    4. An Algorithm to Find All Identical Motifs in Multiple Biological Sequences

      • Ashish Kishor Bindal, R. Sabarinathan, J. Sridhar, D. Sherlin, K. Sekar
      Pages 137-148

    5. Discovery of Non-induced Patterns from Sequences

      • Andrew K. C. Wong, Dennis Zhuang, Gary C. L. Li, En-Shiun Annie Lee
      Pages 149-160

    6. Exploring Homology Using the Concept of Three-State Entropy Vector

      • Armando J. Pinho, Sara P. Garcia, Paulo J. S. G. Ferreira, Vera Afreixo, Carlos A. C. Bastos, António J. R. Neves et al.
      Pages 161-170

    7. A Maximum-Likelihood Formulation and EM Algorithm for the Protein Multiple Alignment Problem

      • Valentina Sulimova, Nikolay Razin, Vadim Mottl, Ilya Muchnik, Casimir Kulikowski
      Pages 171-182

    8. Polynomial Supertree Methods Revisited

      • Malte Brinkmeyer, Thasso Griebel, Sebastian Böcker
      Pages 183-194

    9. Enhancing Graph Database Indexing by Suffix Tree Structure

      • Vincenzo Bonnici, Alfredo Ferro, Rosalba Giugno, Alfredo Pulvirenti, Dennis Shasha
      Pages 195-203
Back to top

Other Volumes

  1. Pattern Recognition in Bioinformatics

Back to top

Keywords

Back to top

Editors and Affiliations

  • Institute for Computing and Information Sciences, Radboud University Nijmegen, Nijmegen, The Netherlands

    Tjeerd M. H. Dijkstra, Elena Marchiori, Tom Heskes

  • Institute for Computing and Information Sciences, Turku Centre for Computer Science, Radboud University Nijmegen, Nijmegen, The Netherlands

    Evgeni Tsivtsivadze

Back to top

Bibliographic Information

Back to top

Publish with us

Policies and ethics

Back to top

Societies and partnerships

Access via your institution

Buy it now

eBook USD 39.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access

Search

Navigation