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Computational Intelligence Methods for Bioinformatics and Biostatistics

14th International Meeting, CIBB 2017, Cagliari, Italy, September 7-9, 2017, Revised Selected Papers

  • Conference proceedings
  • © 2019

Overview

Editors:
  1. Massimo Bartoletti

    1. University of Cagliari, Cagliari, Italy

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  2. Annalisa Barla

    1. University of Genova, Genoa, Italy

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  3. Andrea Bracciali

    1. University of Stirling, Stirling, UK

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  4. Gunnar W. Klau

    1. Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany

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  5. Leif Peterson

    1. Houston Methodist Research Institute, Houston, USA

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  6. Alberto Policriti

    1. University of Udine, Udine, Italy

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  7. Roberto Tagliaferri

    1. University of Salerno, Fisciano, Italy

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 10834)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Included in the following conference series:

Conference proceedings info: CIBB 2017.

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Table of contents (19 papers)

  1. Front Matter

    Pages I-X
    Download chapter PDF

  2. An Open-Source Tool for Managing Time-Evolving Variant Annotation

    • Ilio Catallo, Eleonora Ciceri, Stefania Stenirri, Stefania Merella, Alberto Sanna, Maurizio Ferrari et al.
    Pages 1-8

  3. Extracting Few Representative Reconciliations with Host Switches

    • Mattia Gastaldello, Tiziana Calamoneri, Marie-France Sagot
    Pages 9-18

  4. A Quantitative and Qualitative Characterization of k-mer Based Alignment-Free Phylogeny Construction

    • Filippo Utro, Daniel E. Platt, Laxmi Parida
    Pages 19-31

  5. Cancer Mutational Signatures Identification with Sparse Dictionary Learning

    • Veronica Tozzo, Annalisa Barla
    Pages 32-41

  6. Icing: Large-Scale Inference of Immunoglobulin Clonotypes

    • Federico Tomasi, Margherita Squillario, Alessandro Verri, Davide Bagnara, Annalisa Barla
    Pages 42-50

  7. Adenine: A HPC-Oriented Tool for Biological Data Exploration

    • Samuele Fiorini, Federico Tomasi, Margherita Squillario, Annalisa Barla
    Pages 51-59

  8. Disease–Genes Must Guide Data Source Integration in the Gene Prioritization Process

    • Marco Frasca, Jean Fred Fontaine, Giorgio Valentini, Marco Mesiti, Marco Notaro, Dario Malchiodi et al.
    Pages 60-69

  9. Ensembling Descendant Term Classifiers to Improve Gene - Abnormal Phenotype Predictions

    • Marco Notaro, Max Schubach, Marco Frasca, Marco Mesiti, Peter N. Robinson, Giorgio Valentini
    Pages 70-80

  10. GP-Based Grammatical Inference for Classification of Amyloidogenic Sequences

    • Wojciech Wieczorek, Olgierd Unold
    Pages 81-91

  11. Estimation of Kinetic Reaction Constants: Exploiting Reboot Strategies to Improve PSO’s Performance

    • Simone Spolaor, Andrea Tangherloni, Leonardo Rundo, Paolo Cazzaniga, Marco S. Nobile
    Pages 92-102

  12. Haplotype and Repeat Separation in Long Reads

    • German Tischler-Höhle
    Pages 103-114

  13. Tumor Subclonal Progression Model for Cancer Hallmark Acquisition

    • Yusuke Matsui, Satoru Miyano, Teppei Shimamura
    Pages 115-123

  14. GIMLET: Identifying Biological Modulators in Context-Specific Gene Regulation Using Local Energy Statistics

    • Teppei Shimamura, Yusuke Matsui, Taisuke Kajino, Satoshi Ito, Takashi Takahashi, Satoru Miyano
    Pages 124-137

  15. Structural Features of a DPPG Liposome Layer Adsorbed on a Rough Surface

    • Maria Raposo, Andreia A. Duarte, Paulo J. Gomes, Paulo A. Ribeiro, Marli L. Moraes, Roland Steitz
    Pages 138-144

  16. Chemical Exchanges and Actuation in Liposome-Based Synthetic Cells: Interaction with Biological Cells

    • Giordano Rampioni, Francesca D’Angelo, Alessandro Zennaro, Livia Leoni, Pasquale Stano
    Pages 145-158

  17. A Nano Communication System for CTC Detection in Blood Vessels

    • Luca Felicetti, Mauro Femminella, Gianluca Reali
    Pages 159-170

  18. Experimental Evidences Suggest High Between-Vesicle Diversity of Artificial Vesicle Populations: Results, Models and Implications

    • Pasquale Stano, Roberto Marangoni, Fabio Mavelli
    Pages 171-185

  19. Towards the Synthesis of Photo-Autotrophic Protocells

    • Emiliano Altamura, Paola Albanese, Roberto Marotta, Pasquale Stano, Francesco Milano, Massimo Trotta et al.
    Pages 186-199

  20. Hierarchical Block Matrix Approach for Multi-view Clustering

    • Angela Serra, Maria Domenica Guida, Pietro Lió, Roberto Tagliaferri
    Pages 200-212
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  1. Computational Intelligence Methods for Bioinformatics and Biostatistics

Keywords

About this book

This book constitutes the thoroughly refereed post-conference proceedings of the 14th International Meeting on Computational. Intelligence Methods for Bioinformatics and Biostatistics, CIBB 2017, held in Cagliari, Italy, in September 2017.
The 19 revised full papers presented were carefully reviewed and selected from 44 submissions. The papers deal with the application of computational intelligence to open problems in bioinformatics, biostatistics, systems and synthetic biology, medical informatics, computational approaches to life sciences in general.

Editors and Affiliations

  • University of Cagliari, Cagliari, Italy

    Massimo Bartoletti

  • University of Genova, Genoa, Italy

    Annalisa Barla

  • University of Stirling, Stirling, UK

    Andrea Bracciali

  • Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany

    Gunnar W. Klau

  • Houston Methodist Research Institute, Houston, USA

    Leif Peterson

  • University of Udine, Udine, Italy

    Alberto Policriti

  • University of Salerno, Fisciano, Italy

    Roberto Tagliaferri

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