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  • © 2015

Rab GTPases

Methods and Protocols

Editors:

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts

Part of the book series: Methods in Molecular Biology (MIMB, volume 1298)

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Table of contents (29 protocols)

  1. Front Matter

    Pages i-xiv
  2. Rab Family of GTPases

    • Guangpu Li, M. Caleb Marlin
    Pages 1-15
  3. Bioinformatic Approaches to Identifying and Classifying Rab Proteins

    • Yoan Diekmann, José B. Pereira-Leal
    Pages 17-28
  4. Rab-NANOPS: FRET Biosensors for Rab Membrane Nanoclustering and Prenylation Detection in Mammalian Cells

    • Arafath Kaja Najumudeen, Camilo Guzmán, Itziar M. D. Posada, Daniel Abankwa
    Pages 29-45
  5. Analysis of the Interactions Between Rab GTPases and Class V Myosins

    • Andrew J. Lindsay, Stéphanie Miserey-Lenkei, Bruno Goud
    Pages 73-83
  6. Kinetic Activation of Rab8 Guanine Nucleotide Exchange Factor Rabin8 by Rab11

    • Shanshan Feng, Bin Wu, Johan Peränen, Wei Guo
    Pages 99-106
  7. Identifying a Rab Effector on the Macroautophagy Pathway

    • Juan Wang, Serena Cervantes, Saralin Davis, Susan Ferro-Novick
    Pages 117-125
  8. Functional Analysis of Rab27A and Its Effector Slp2-a in Renal Epithelial Cells

    • Takao Yasuda, Paulina S. Mrozowska, Mitsunori Fukuda
    Pages 127-139
  9. Small GTPases in Acrosomal Exocytosis

    • Matias A. Bustos, Ornella Lucchesi, Maria C. Ruete, Luis S. Mayorga, Claudia N. Tomes
    Pages 141-160
  10. Rab Antibody Characterization: Comparison of Rab14 Antibodies

    • Andrew J. Lindsay, Mary W. McCaffrey
    Pages 161-171
  11. Characterization of the Role Rab25 in Energy Metabolism and Cancer Using Extracellular Flux Analysis and Material Balance

    • Shreya Mitra, Jennifer Molina, Gordon B. Mills, Jennifer B. Dennison
    Pages 195-205
  12. Measurement of Rab35 Activity with the GTP-Rab35 Trapper RBD35

    • Hotaka Kobayashi, Kan Etoh, Soujiro Marubashi, Norihiko Ohbayashi, Mitsunori Fukuda
    Pages 207-216
  13. Analysis of Connecdenn 1–3 (DENN1A-C) GEF Activity for Rab35

    • Patrick D. Allaire, Peter S. McPherson, Brigitte Ritter
    Pages 217-231

About this book

This volume covers the latest technological advances in the characterization of the biosynthesis and functions of Rab GTPases and their regulation by guanine nucleotide exchange factors (GEFs) and GTPase-activating proteins (GAPs). The book consists of 28 chapters and starts with an overview of the Rab GTPase family. The next few chapters describe systematic approaches to the identification and classification of Rabs and Rab GAPs, as well as the detection of Rab isoprenylation and membrane distribution. The last few chapters examine the biochemical and functional properties of individual Rabs in the order of exocytic, recycling and endocytic Rabs. Written in the highly successful Methods of Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols and key tips on troubleshooting and avoiding known pitfalls.

Instructive and practical, Rab GTPases: Methods and Protocols approaches each topic with great detail and is a valuable resource for researchers and students interested in the field of Rab GTPases.

Editors and Affiliations

  • Department of Biochemistry and Molecular Biology, Peggy and Charles Stephenson Cancer Center, University of Oklahoma Health Sciences Center, Oklahoma City, USA

    Guangpu Li

About the editor

Guangpu Li, Ph.D. Department of Biochemistry and Molecular Biology University of Oklahoma Health Sciences Center 975 NE 10th Street, BRC 417B Oklahoma City, OK 73104 Tel: (405) 271-2227 ext. 61232 Fax: (405) 271-3910 E-mail: guangpu-li@ouhsc.edu

Bibliographic Information

  • Book Title: Rab GTPases

  • Book Subtitle: Methods and Protocols

  • Editors: Guangpu Li

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-4939-2569-8

  • Publisher: Humana New York, NY

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media New York 2015

  • Hardcover ISBN: 978-1-4939-2568-1Published: 25 March 2015

  • Softcover ISBN: 978-1-4939-5594-7Published: 05 October 2016

  • eBook ISBN: 978-1-4939-2569-8Published: 23 March 2015

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XIV, 358

  • Number of Illustrations: 28 b/w illustrations, 54 illustrations in colour

  • Topics: Biochemistry, general, Membrane Biology

Buy it now

Buying options

eBook USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 139.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access