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  • © 2018

Protein-Protein and Domain-Domain Interactions

  • This is the first book to combine Protein-Protein interactions with domain-domain interactions explaining the mechanism of gene fusion with appropriate hypothesis

  • This book provides a comprehensive overview of advanced topics in Bioinformatics

  • This book explains complex concepts on the subject using simple graphical illustrations

  • Each chapter will contain 20 exercise problems or questions for practice

  • It provides a descriptive understanding of molecular regulation towards vaccine development and disease-specific target discovery

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Table of contents (19 chapters)

  1. Front Matter

    Pages i-xix
  2. Introduction

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 1-14
  3. Protein-Protein Binding

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 15-33
  4. Low-Resolution Protein Complexes

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 35-54
  5. Heterodimer Protein Complexes

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 55-68
  6. Homo Multimer Protein Complexes

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 69-78
  7. Hetero Multimer Protein Complexes

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 79-86
  8. Hot Spots at the Protein-Protein Interface

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 87-92
  9. Principles of Protein-Protein Interaction

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 93-111
  10. Databases for Protein-Protein Interaction

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 113-124
  11. Homodimer Protein Folding and Binding

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 125-132
  12. Protein Subunit-Subunit to Domain-Domain Interactions

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 133-142
  13. Domain-Domain Interactions

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 143-146
  14. Protein-Protein Interaction Tools

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 147-159
  15. Protein-Protein Docking: Methods and Tools

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 161-168
  16. HLA-Peptide Interaction to Short Peptide Vaccine Design

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 169-178
  17. Protein-Protein Interfaces and Diseases

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 179-187
  18. Patented Protein Structural Complexes in Discovery Platform

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 189-197
  19. Proteome-Scale Analysis of Protein Complexes

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 199-201
  20. Conclusions and Challenges

    • Pandjassarame Kangueane, Christina Nilofer
    Pages 203-205

About this book

This book illustrates the importance and significance of the molecular (physical and chemical) and evolutionary (gene fusion) principles of protein-protein and domain-domain interactions towards the understanding of cell division, disease mechanism and target definition in drug discovery. It describes the complex issues associated with this phenomenon using cutting edge advancement in Bioinformatics and Bioinformation Discovery. The chapters provide current information pertaining to the types of protein-protein complexes (homodimers, heterodimers, multimer complexes) in context with various specific and sensitive biological functions. The significance of such complex formation in human biology in the light of molecular evolution is also highlighted using several examples. The chapters also describe recent advancements on the molecular principles of protein-protein interaction with reference to evolution towards target identification in drug discovery. Finally, the book also elucidates a comprehensive yet a representative description of a large number of challenges associated with the molecular interaction of proteins. 

Authors and Affiliations

  • Biomedical Informatics, Pondicherry, India

    Pandjassarame Kangueane

  • School of Bio Sciences and Technology, VIT University, Vellore, India

    Christina Nilofer

About the authors

Dr. Pandjassarame Kangueane is Director of Biomedical Informatics (P) Ltd, India, Chief Editor, Bioinformation, India and Associate Editor, BMC Bioinformatics, UK. He served as a professor at the Department of Biotechnology at AIMST University, Malaysia (2009-2011), visiting professor at VIT University, India (2007-2009), assistant professor at NTU, Singapore (2002-2006) and visiting scientist (S*Bio Pte Ltd) at the Chiron Corporation (2001), USA. His research interest is in bioinformatics and biotechnology, particularly HLA-based peptide vaccine design, protein-protein interactions, lipase (an enzyme) engineering and genome biology. He has received various prestigious awards, notably the Indian Leadership award for Industrial Development from the All India Achievers Foundation, Vishal Bharathi award with the Bharath Jothi award from the GOPIO, France and was made an Ambassador for Peace by the Universal Peace Federation for his contribution to science and technology. He has served as referee for a number of international journals, including Bioinformatics (UK), Nucleic Acids Research (UK), Vaccines (USA), Plos ONE (USA), BMC Genomics (UK), the Journal of Molecular Modeling & Graphics (USA) and BMC Bioinformatics. He has more than 15 years of teaching experience in bioinformatics, bioprocess technology, biotechnology and computing.

He has also published more than 50 research articles in peer-reviewed international journals and authored or co-authored numerous books and book chapters. He is a member of numerous international scientific societies and organizations, such as APBioNet, Singapore, the Agro Informatics Society and the Biomedical Informatics Society, India.

Ms. Christina Nilofer is a scientist at Biomedical Informatics (P) Ltd. She continued her postgraduate studies at Stella Maris College (Autonomous), Madras University, Chennai, India and is currently completing her doctorate in Biotechnology at VIT University, Vellore, India. She has served as researcher in biotechnology (Saksin Lifesciences (P) Ltd) and bioinformatics (Genome Life Sciences (P) Ltd) industries. She has authored and co-authored two book chapters and published two articles in peer-reviewed journals.

Bibliographic Information

  • Book Title: Protein-Protein and Domain-Domain Interactions

  • Authors: Pandjassarame Kangueane, Christina Nilofer

  • DOI: https://doi.org/10.1007/978-981-10-7347-2

  • Publisher: Springer Singapore

  • eBook Packages: Biomedical and Life Sciences, Biomedical and Life Sciences (R0)

  • Copyright Information: Springer Nature Singapore Pte Ltd. 2018

  • Hardcover ISBN: 978-981-10-7346-5Published: 01 March 2018

  • Softcover ISBN: 978-981-13-3942-4Published: 15 January 2019

  • eBook ISBN: 978-981-10-7347-2Published: 16 February 2018

  • Edition Number: 1

  • Number of Pages: XIX, 207

  • Number of Illustrations: 79 b/w illustrations, 82 illustrations in colour

  • Topics: Gene Function, Computational Biology/Bioinformatics, Protein Science, Vaccine

Buy it now

Buying options

eBook USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access