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DNA Computing

14th International Meeting on DNA Computing, DNA 14, Prague, Czech Republic, June 2-9, 2008. Revised Selected Papers

  • Conference proceedings
  • © 2009

Overview

Editors:
  1. Ashish Goel

    1. Department of Management Science and Engineering and (by courtesy) Computer Science, Stanford University, USA

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    You can also search for this editor in PubMed   Google Scholar

  2. Friedrich C. Simmel

    1. Physics Department, TU Munich, Garching, Germany

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    You can also search for this editor in PubMed   Google Scholar

  3. Petr Sosík

    1. Institute of Computer Science, Faculty of Philosophy and Science, Silesian University, Opava, Czech Republic

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    You can also search for this editor in PubMed   Google Scholar

Part of the book series: Lecture Notes in Computer Science (LNCS, volume 5347)

Part of the book sub series: Theoretical Computer Science and General Issues (LNTCS)

Included in the following conference series:

Conference proceedings info: DNA 2008.

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Table of contents (15 papers)

  1. Front Matter

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  2. Experimental Validation of Signal Dependent Operation in Whiplash PCR

    • Ken Komiya, Masayuki Yamamura, John A. Rose
    Pages 1-10

  3. Towards DNA Comparator: The Machine That Compares DNA Concentrations

    • Fumiaki Tanaka, Takashi Tsuda, Masami Hagiya
    Pages 11-20

  4. Construction of Photon-Fueled DNA Nanomachines by Tethering Azobenzenes as Engines

    • Xingguo Liang, Hidenori Nishioka, Nobutaka Takenaka, Hiroyuki Asanuma
    Pages 21-32

  5. Operon Structure Optimization by Random Self-assembly

    • Yusuke Nakagawa, Katsuyuki Yugi, Kenji Tsuge, Mitsuhiro Itaya, Hiroshi Yanagawa, Yasubumi Sakakibara
    Pages 33-40

  6. Isothermal Reactivating Whiplash PCR for Locally Programmable Molecular Computation

    • John H. Reif, Urmi Majumder
    Pages 41-56

  7. DNA as a Universal Substrate for Chemical Kinetics

    • David Soloveichik, Georg Seelig, Erik Winfree
    Pages 57-69

  8. A Simple DNA Gate Motif for Synthesizing Large-Scale Circuits

    • Lulu Qian, Erik Winfree
    Pages 70-89

  9. Tiamat: A Three-Dimensional Editing Tool for Complex DNA Structures

    • Sean Williams, Kyle Lund, Chenxiang Lin, Peter Wonka, Stuart Lindsay, Hao Yan
    Pages 90-101

  10. Connecting the Dots: Molecular Machinery for Distributed Robotics

    • Yuriy Brun, Dustin Reishus
    Pages 102-111

  11. Polyomino-Safe DNA Self-assembly via Block Replacement

    • Chris Luhrs
    Pages 112-126

  12. Robust Self-assembly of Graphs

    • Stanislav Angelov, Sanjeev Khanna, Mirkó Visontai
    Pages 127-143

  13. Time Optimal Self-assembly for 2D and 3D Shapes: The Case of Squares and Cubes

    • Florent Becker, Éric Rémila, Nicolas Schabanel
    Pages 144-155

  14. Self-assembly of Discrete Self-similar Fractals

    • Matthew J. Patitz, Scott M. Summers
    Pages 156-167

  15. Speeding Up Local-Search Type Algorithms for Designing DNA Sequences under Thermodynamical Constraints

    • Suguru Kawashimo, Yen Kaow Ng, Hirotaka Ono, Kunihiko Sadakane, Masafumi Yamashita
    Pages 168-178

  16. Sequentiality Induced by Spike Number in SNP Systems

    • Oscar H. Ibarra, Andrei Păun, Alfonso Rodríguez-Patón
    Pages 179-190

  17. Back Matter

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  1. DNA Computing

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Editors and Affiliations

  • Department of Management Science and Engineering and (by courtesy) Computer Science, Stanford University, USA

    Ashish Goel

  • Physics Department, TU Munich, Garching, Germany

    Friedrich C. Simmel

  • Institute of Computer Science, Faculty of Philosophy and Science, Silesian University, Opava, Czech Republic

    Petr Sosík

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