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Strain Variation in the Mycobacterium tuberculosis Complex: Its Role in Biology, Epidemiology and Control

  • Brings together a series of contributions from the most influential groups working on various aspects of M. tuberculosis diversity
  • Focuses on the evolution of M. tuberculosis in relation to other members of the M. tuberculosis complex adapted to animals
  • Summarizes findings that have led to a paradigm shift, such that currently phylogenetic diversity among M. tuberculosis clinical strains is being considered in the development of new tools to combat tuberculosis

Part of the book series: Advances in Experimental Medicine and Biology (AEMB, volume 1019)

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Table of contents (15 chapters)

  1. Front Matter

    Pages i-xi
  2. The Biology and Epidemiology of Mycobacterium canettii

    • Philip Supply, Roland Brosch
    Pages 27-41
  3. The Evolution of Strain Typing in the Mycobacterium tuberculosis Complex

    • Matthias Merker, Thomas A. Kohl, Stefan Niemann, Philip Supply
    Pages 43-78
  4. Genomic Epidemiology of Tuberculosis

    • Iñaki Comas
    Pages 79-93
  5. The Biology and Epidemiology of Mycobacterium africanum

    • Dorothy Yeboah-Manu, Bouke C. de Jong, Florian Gehre
    Pages 117-133
  6. Evolution and Strain Variation in BCG

    • Abdallah M. Abdallah, Marcel A. Behr
    Pages 155-169
  7. PE and PPE Genes: A Tale of Conservation and Diversity

    • Giovanni Delogu, Michael J. Brennan, Riccardo Manganelli
    Pages 191-207
  8. Epidemiology of Drug-Resistant Tuberculosis

    • Anna S. Dean, Helen Cox, Matteo Zignol
    Pages 209-220
  9. Evolution of Phenotypic and Molecular Drug Susceptibility Testing

    • Daniela M. Cirillo, Paolo Miotto, Enrico Tortoli
    Pages 221-246
  10. DNA Replication Fidelity in the Mycobacterium tuberculosis Complex

    • Digby F. Warner, Jeremy M. Rock, Sarah M. Fortune, Valerie Mizrahi
    Pages 247-262
  11. Strain Diversity and the Evolution of Antibiotic Resistance

    • Sonia Borrell, Andrej Trauner
    Pages 263-279
  12. Mathematical Models for the Epidemiology and Evolution of Mycobacterium tuberculosis

    • Jūlija Pečerska, James Wood, Mark M. Tanaka, Tanja Stadler
    Pages 281-307
  13. Back Matter

    Pages 309-314

About this book

Until about 10 years ago, the general view in the field was that Mycobacterium tuberculosis, the causative agent of human tuberculosis was a “clone” with insufficient natural sequence variation between clinical strains to be considered biologically and epidemiologically “relevant”. This view has now changed quite dramatically thanks to the –omics revolution, particularly the advent of next generation DNA sequencing. Large-scale comparative genomic studies over the last few years have revealed that M. tuberculosis clinical strains are more genetically diverse than appreciated previously. Moreover, an increasing number of experimental and epidemiological studies are showing that this genetic diversity also translates into important phenotypic variation. Taken together, these findings have led to a paradigm shift, such that currently phylogenetic diversity among M. tuberculosis clinical strains is being considered in the development of new tools to combat tuberculosis.
The purpose of this book is to bring together a series of contributions from some of the most influential groups working on various aspects of M. tuberculosis diversity, and which through their work have contributed to the this paradigm shift. This includes authors focusing on the evolution of M. tuberculosis in relation to other members of the M. tuberculosis complex adapted to animals, the co-evolution between M. tuberculosis and humans, the phenotypic consequences of strains diversity both from an experimental and epidemiological point of view, the ecology and evolution of drug resistant tuberculosis, the diversity and evolution of the BCG vaccine strains, and the use of mathematical modelling to study strain diversity and drug resistance in human tuberculosis. No such book has ever been published, and given the paradigm shift described above, this book will be a valuable resource both for established researchers as well as new scientists, clinicians and public health officials joining the growing field of tuberculosis research.

Editors and Affiliations

  • Swiss Tropical & Public Health Institute, University of Basel, Basel, Switzerland

    Sebastien Gagneux

About the editor

Sébastien Gagneux is Associate Professor of Infection Biology and Head of Department at the Swiss Tropical and Public Health Institute (Swiss TPH)/University of Basel. After receiving his PhD from the University of Basel, he worked as a postdoctoral fellow at Stanford University and at the Institute for Systems Biology in Seattle, USA. He then spent three years as a Program Leader at the MRC National Institute for Medical Research in London, UK before joining Swiss TPH. His research focuses on the ecology and evolution of Mycobacterium tuberculosis, and combines population genomics, molecular epidemiology and experimental approaches to study the effect of bacterial variation on host-pathogen interaction and drug resistance

Bibliographic Information

  • Book Title: Strain Variation in the Mycobacterium tuberculosis Complex: Its Role in Biology, Epidemiology and Control

  • Editors: Sebastien Gagneux

  • Series Title: Advances in Experimental Medicine and Biology

  • DOI: https://doi.org/10.1007/978-3-319-64371-7

  • Publisher: Springer Cham

  • eBook Packages: Biomedical and Life Sciences, Biomedical and Life Sciences (R0)

  • Copyright Information: The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Nature Switzerland AG 2017

  • Hardcover ISBN: 978-3-319-64369-4Published: 22 November 2017

  • Softcover ISBN: 978-3-319-87776-1Published: 31 August 2018

  • eBook ISBN: 978-3-319-64371-7Published: 06 November 2017

  • Series ISSN: 0065-2598

  • Series E-ISSN: 2214-8019

  • Edition Number: 1

  • Number of Pages: XI, 314

  • Number of Illustrations: 2 b/w illustrations, 31 illustrations in colour

  • Topics: Bacteriology, Drug Resistance

Buy it now

Buying options

eBook USD 149.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 199.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 199.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access