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  • Book
  • © 2011

Epigenetics Protocols

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts
  • Includes supplementary material: sn.pub/extras

Part of the book series: Methods in Molecular Biology (MIMB, volume 791)

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Table of contents (23 protocols)

  1. Front Matter

    Pages i-xi
  2. Advances in Epigenetic Technology

    • Trygve O. Tollefsbol
    Pages 1-10
  3. DNA Methylation Detection: Bisulfite Genomic Sequencing Analysis

    • Yuanyuan Li, Trygve O. Tollefsbol
    Pages 11-21
  4. Methylation-Specific PCR

    • Ja-Lok Ku, You-Kyung Jeon, Jae-Gahb Park
    Pages 23-32
  5. Analysing DNA Methylation Using Bisulphite Pyrosequencing

    • Thomas Mikeska, Jörg Felsberg, Chelsee A. Hewitt, Alexander Dobrovic
    Pages 33-53
  6. Closed-Tube PCR Methods for Locus-Specific DNA Methylation Analysis

    • Ida L. M. Candiloro, Thomas Mikeska, Alexander Dobrovic
    Pages 55-71
  7. A Combined Bisulfite Restriction Analysis Bioinformatics Tool: Methyl-Typing

    • Cheng-Hong Yang, Yu-Huei Cheng, Li-Yeh Chuang, Hsueh-Wei Chang
    Pages 73-88
  8. SIRPH: An HPLC-Based SNuPE for Quantitative Methylation Measurement at Specific CpG Sites

    • Heike Singer, Nicole Nüsgen, Osman El-Maarri
    Pages 89-100
  9. Restriction Landmark Genome Scanning

    • Hisato Okuizumi, Tomoko Takamiya, Yasushi Okazaki, Yoshihide Hayashizaki
    Pages 101-112
  10. Methylated DNA Immunoprecipitation Genome-Wide Analysis

    • Mattia Pelizzola, Annette Molinaro
    Pages 113-123
  11. Methylated-CpG Island Recovery Assay

    • Natalie Mitchell, J. Tyson DeAngelis, Trygve O. Tollefsbol
    Pages 125-133
  12. Global DNA Methylation Analysis Using the Luminometric Methylation Assay

    • Mohsen Karimi, Karin Luttropp, Tomas J. Ekström
    Pages 135-144
  13. Inhibition of DNA Methylation in Somatic Cells

    • Angelica M. Giraldo, Kenneth R. Bondioli
    Pages 145-156
  14. DNA Methyltransferase Assays

    • Renata Z. Jurkowska, Alexandre Ceccaldi, Yingying Zhang, Paola B. Arimondo, Albert Jeltsch
    Pages 157-177
  15. Native Chromatin Immunoprecipitation

    • Céline Cosseau, Christoph Grunau
    Pages 195-212
  16. Q-PCR in Combination with ChIP Assays to Detect Changes in Chromatin Acetylation

    • Ryan A. Irvine, Cindy Okitsu, Chih-Lin Hsieh
    Pages 213-223
  17. Studying RNA–Protein Interactions In Vivo By RNA Immunoprecipitation

    • Luke A. Selth, Pierre Close, Jesper Q. Svejstrup
    Pages 253-264

About this book

The field of epigenetics has played a major role at the forefront not only of molecular biology, but also of medical genetics and clinical medicine.  Few disciplines have experienced growth comparable to that which we have witnessed for epigenetics in the past decade. The goal of Epigenetics Protocols, Second Edition is to highlight select techniques that have been mainstays in the field as well as to cover methods that are especially relevant to extant discoveries in epigenetics.  This volume focuses on the two broad areas of epigenetics: DNA methylation and chromatin modifications, and also covers the complex topic of computational methods for epigenetic analyses which is essential to a complete understanding of the vast body of information that is being derived with the use of these newly-developed tools.  Written in the highly successful Methods in Molecular Biology™ series format, chapters contain introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting and avoiding known pitfalls.

 

Authoritative and accessible, Epigenetics Protocols, Second Edition serves as an ideal guide to advanced students, basic scientists and clinical researchers as well as clinicians and biotechnology investigators who wish to continue exploring this exciting and progressive research field.

Editors and Affiliations

  • Dept. Biology, University of Alabama, Birmingham, Birmingham, USA

    Trygve O. Tollefsbol

Bibliographic Information

  • Book Title: Epigenetics Protocols

  • Editors: Trygve O. Tollefsbol

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-61779-316-5

  • Publisher: Humana Totowa, NJ

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media, LLC 2011

  • Hardcover ISBN: 978-1-61779-315-8Published: 15 September 2011

  • Softcover ISBN: 978-1-4939-6187-0Published: 23 August 2016

  • eBook ISBN: 978-1-61779-316-5Published: 15 September 2011

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 2

  • Number of Pages: XI, 332

  • Number of Illustrations: 54 b/w illustrations

  • Topics: Human Genetics, Gene Expression

Buy it now

Buying options

eBook USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access