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  • © 2010

Microarray Methods for Drug Discovery

  • Supplies new information on microarrays for cytogenetics and drug metabolism
  • Covers a wide range of microarray platforms used in genomics, epigenomics, genotyping, proteomics, and small molecule screening
  • A good reference for designing microarray experiments to decipher transcriptome regulation and DNA modifications
  • Includes supplementary material: sn.pub/extras

Part of the book series: Methods in Molecular Biology (MIMB, volume 632)

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Table of contents (17 protocols)

  1. Front Matter

    Pages i-xi
  2. Multicenter Clinical Sample Collection for Microarray Analysis

    • Tony S. Mondala, Daniel R. Salomon, Steven R. Head
    Pages 1-26
  3. Microarray Analysis of Embryonic Stem Cells and Differentiated Embryoid Bodies

    • Alexander C. Zambon, Christopher S. Barker
    Pages 45-61
  4. Determination of Alternate Splicing Events Using the Affymetrix Exon 1.0 ST Arrays

    • Sita Subbaram, Marcy Kuentzel, David Frank, C. Michael DiPersio, Sridar V. Chittur
    Pages 63-72
  5. Profiling microRNA Expression with the Illumina BeadChip Platform

    • Julissa Tsao, Patrick Yau, Neil Winegarden
    Pages 73-86
  6. TaqMan® Array Cards in Pharmaceutical Research

    • David N. Keys, Janice K. Au-Young, Richard A. Fekete
    Pages 87-97
  7. DMET™ Microarray Technology for Pharmacogenomics-Based Personalized Medicine

    • James K. Burmester, Marina Sedova, Michael H. Shapero, Elaine Mansfield
    Pages 99-124
  8. The Use of Microarray Technology for Cytogenetics

    • Bassem A. Bejjani, Lisa G. Shaffer, Blake C. Ballif
    Pages 125-139
  9. PCR/LDR/Universal Array Platforms for the Diagnosis of Infectious Disease

    • Maneesh Pingle, Mark Rundell, Sanchita Das, Linnie M. Golightly, Francis Barany
    Pages 141-157
  10. RIP-CHIP in Drug Development

    • Ritu Jain, Francis Doyle, Ajish D. George, Marcy Kuentzel, David Frank, Sridar V. Chittur et al.
    Pages 159-171
  11. ChIPing Away at Global Transcriptional Regulation

    • Kelly Jackson, James Paris, Mark Takahashi
    Pages 173-189
  12. Use of Tissue Microarray to Facilitate Oncology Research

    • Panagiotis Gouveris, Paul M. Weinberger, Amanda Psyrri
    Pages 239-250
  13. Small Molecule Selectivity and Specificity Profiling Using Functional Protein Microarrays

    • Peter R. Kraus, Lihao Meng, Lisa Freeman-Cook
    Pages 251-267
  14. Production and Application of Glycan Microarrays

    • Julia Busch, Ryan McBride, Steven R. Head
    Pages 269-282
  15. Back Matter

    Pages 283-284

About this book

While the utilization of microarrays for gene expression studies has been widely published, Microarray Methods for Drug Discovery describes the use of this technology for a multitude of other vital applications. Covering the field of drug discovery through its various aspects, including high throughput screening, target identification, drug metabolism and toxicity screening as well as clinical sample handling, this volume also addresses new emerging fields like miRNA profiling, ribonomic and glycomic profiling. All chapters, contributed by experts in the field, follow the highly successful Methods in Molecular Biology™ series format, which is comprised of brief introductions, lists of required materials and reagents, readily reproducible, step-by-step lab protocols, along with detailed tips on troubleshooting and avoiding known pitfalls, making this book an easy read for investigators at all levels of expertise.

Authoritative and cutting-edge, Microarray Methods for Drug Discovery provides an ideal desk reference for scientists who wish to use microarray technology in order to better understand a variety of biological interactions in their respective fields.

Reviews

From the reviews:

“Microarray Methods for Drug Discovery is volume number 632 of the Springer Protocols Methods in Biology Series. … it provides detailed experimental protocols for the use of microarrays in a variety of applications. … chapters are obviously highly bespoke and would be of real value to laboratories wishing to establish the method. Finally, the microarray area is now so broad that the non-nucleic acid application of microarrays would justify a methods book in its own right.” (James Sidaway, BTS Newsletter, Issue 37, Winter, 2010)

“Methods in Microarrays provide scientists with a complete resource on the most effective tools available for maximizing microarray data in biochemical methods. … Microarrays are extensively used in the effects of compounds on gene expression in cells. This book aims at enlightening individuals of all levels of experience about some of the most common applications of microarrays in drug discovery and development. This book will serve as a reference for students and scientists … .” (Veni Maria Andres Felli, Brazilian Journal of Pharmaceutical Sciences, May, 2010)

Editors and Affiliations

  • Department of Biomedical Sciences Schools of Public Health Centre for Functional Genomics, University at Albany-SUNY, Rensselaer, USA

    Sridar V. Chittur

Bibliographic Information

  • Book Title: Microarray Methods for Drug Discovery

  • Editors: Sridar V. Chittur

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-60761-663-4

  • Publisher: Humana Totowa, NJ

  • eBook Packages: Springer Protocols

  • Copyright Information: Humana Press 2010

  • Hardcover ISBN: 978-1-60761-662-7Published: 18 March 2010

  • Softcover ISBN: 978-1-4939-5739-2Published: 23 August 2016

  • eBook ISBN: 978-1-60761-663-4Published: 10 March 2010

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XI, 285

  • Topics: Pharmacology/Toxicology, Human Genetics

Buy it now

Buying options

eBook USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 159.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access