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  • © 2019

DNA Repair

Methods and Protocols

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts

Part of the book series: Methods in Molecular Biology (MIMB, volume 1999)

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Table of contents (24 protocols)

  1. Front Matter

    Pages i-xv
  2. Reviews

    1. Front Matter

      Pages 1-1
    2. Resolving Roadblocks to Telomere Replication

      • Emily Mason-Osann, Himabindu Gali, Rachel Litman Flynn
      Pages 31-57
  3. Cellular Assays to Detect and Measure DNA Damage and Damage Response

    1. Front Matter

      Pages 59-59
    2. In Time and Space: Laser Microirradiation and the DNA Damage Response

      • Jae Jin Kim, Ramhari Kumbhar, Fade Gong, Kyle M. Miller
      Pages 61-74
    3. Methods to Study Trinucleotide Repeat Instability Induced by DNA Damage and Repair

      • Yanhao Lai, Ruipeng Lei, Yaou Ren, Yuan Liu
      Pages 87-101
    4. Extracting and Measuring dNTP Pools in Saccharomyces cerevisiae

      • Radha Subramaniam, Natalie A. Lamb, Yoonchan Hwang, Lauren Johengen, Jennifer A. Surtees
      Pages 103-127
  4. Cellular and Cell Extract-Based Assays to Measure DNA Repair

    1. Front Matter

      Pages 129-129
    2. Reporter Assays for BER Pathway

      • Dorota Piekna-Przybylska
      Pages 145-160
    3. Cellular Assays to Study the Functional Importance of Human DNA Repair Helicases

      • Sanket Awate, Srijita Dhar, Joshua A. Sommers, Robert M. Brosh Jr.
      Pages 185-207
    4. Small-Molecule Inhibitor Screen for DNA Repair Proteins

      • John J. Turchi, Pamela S. VanderVere-Carozza
      Pages 217-221
  5. In Vitro Biochemical and Biophysical Methods to Study DNA Repair

    1. Front Matter

      Pages 223-223
    2. Assembling the Human Resectosome on DNA Curtains

      • Michael M. Soniat, Logan R. Myler, Ilya J. Finkelstein
      Pages 225-244
    3. Thin-Layer Chromatography and Real-Time Coupled Assays to Measure ATP Hydrolysis

      • Christopher W. Sausen, Cody M. Rogers, Matthew L. Bochman
      Pages 245-253

About this book

The volume outlines techniques used to study the primary mechanisms of important DNA repair pathways. The chapters in this book are organized into five sections, each discussing a specific aspect of repair biology. Part I reviews the role of post-translational modifications of HDR, and DNA damage caused by defective telomere replication. Part II describes methods to detect and measure DNA breaks and proteins involved in DNA damage response. Part III talks about methods designed to measure DNA repair efficiency and characterize factors involved in the repair process. Part IV discusses various in vitro assays used to purify recombinant proteins that are used to study DNA repair enzyme mechanisms. Lastly, Part V focuses on methods to study the damage arising during DNA replication. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

Cutting-edge and authoritative, DNA Repair: Methods and Protocols is an essential resource for novice and experienced researchers, and provides easily adaptable techniques to help them advance in their specific protein or repair pathway of interest.


Editors and Affiliations

  • Indiana University – Purdue University, Indianapolis, USA

    Lata Balakrishnan

  • Department of Biological Sciences, University of South Carolina, Columbia, USA

    Jason A. Stewart

Bibliographic Information

  • Book Title: DNA Repair

  • Book Subtitle: Methods and Protocols

  • Editors: Lata Balakrishnan, Jason A. Stewart

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-4939-9500-4

  • Publisher: Humana New York, NY

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media, LLC, part of Springer Nature 2019

  • Hardcover ISBN: 978-1-4939-9499-1Published: 25 May 2019

  • Softcover ISBN: 978-1-4939-9502-8Published: 14 August 2020

  • eBook ISBN: 978-1-4939-9500-4Published: 24 May 2019

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XV, 352

  • Number of Illustrations: 29 b/w illustrations, 64 illustrations in colour

  • Topics: Human Genetics

Buy it now

Buying options

eBook USD 109.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 139.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access