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  • © 2016

The Wilms' Tumor (WT1) Gene

Methods and Protocols

Editors:

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains keynotes and implementation advice from the experts
  • Includes supplementary material: sn.pub/extras

Part of the book series: Methods in Molecular Biology (MIMB, volume 1467)

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Table of contents (19 protocols)

  1. Front Matter

    Pages i-x
  2. WT1 Mutation in Childhood Cancer

    • Jocelyn Charlton, Kathy Pritchard-Jones
    Pages 1-14
  3. Clinical Aspects of WT1 and the Kidney

    • Eve Miller-Hodges
    Pages 15-21
  4. The Role of WT1 in Embryonic Development and Normal Organ Homeostasis

    • Bettina Wilm, Ramon Muñoz-Chapuli
    Pages 23-39
  5. Tools and Techniques for Wt1-Based Lineage Tracing

    • Bettina Wilm, Ramon Muñoz-Chapuli
    Pages 41-59
  6. Biological Systems and Methods for Studying WT1 in the Epicardium

    • VĂ­ctor Velecela, Janat Fazal-Salom, Ofelia M. MartĂ­nez-Estrada
    Pages 61-71
  7. Isolation and Colony Formation of Murine Bone and Bone Marrow Cells

    • Sophie McHaffie, You-Ying Chau
    Pages 73-80
  8. In Vivo Assays for Assessing the Role of the Wilms’ Tumor Suppressor 1 (Wt1) in Angiogenesis

    • Richard J. McGregor, R. Ogley, PWF Hadoke, Nicholas Hastie
    Pages 93-104
  9. Multiphoton Microscopy for Visualizing Lipids in Tissue

    • Martin Lee, Alan Serrels
    Pages 105-118
  10. Function and Regulation of the Wilms’ Tumor Suppressor 1 (WT1) Gene in Fish

    • Birgit Perner, Thomas J. D. Bates, Uta Naumann, Christoph Englert
    Pages 119-128
  11. Fluorescence-Activated Cell Sorting (FACS) Protocol for Podocyte Isolation in Adult Zebrafish

    • Thomas J. D. Bates, Uta Naumann, Christoph Englert
    Pages 133-136
  12. In Vitro Transcription to Study WT1 Function

    • Stefan G. E. Roberts
    Pages 137-154
  13. Identifying Direct Downstream Targets: WT1 ChIP-Seq Analysis

    • Fabio da Silva, Filippo Massa, Andreas Schedl
    Pages 177-188
  14. WT1-Associated Protein–Protein Interaction Networks

    • Ruthrothaselvi Bharathavikru, Alex von Kriegsheim
    Pages 189-196
  15. Methods to Identify and Validate WT1–RNA Interaction

    • Ruthrothaselvi Bharathavikru, Tatiana Dudnakova
    Pages 197-209

About this book

This volume provides a thorough overview of the Wilms’ Tumour Gene (WT1). The book begins with three review chapters that cover the involvement of WT1 in pediatric cancer, kidney disease, and tissue development and homeostasis. The next few chapters discuss cell marking and lineage tracing, epicardial cell methodology, colony forming assays for bone marrow stem cells, angiogenesis assays and zebrafish tools.  The next group of chapters explores the latest tools in genomics, molecular biology, and biochemistry. They discuss dissecting transcription factor function in cell free systems, ChiP seq, proteomics, RNA interactome, and multiphoton imaging of lipids, measuring the binding constants of protein-nucleic acid interactions, and bioinformatics approaches for analyzing Next Generation Sequence data. The final chapter discusses protocols for clinical trials for immune therapy using anti-WT1 peptides. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

Practical and thorough, The Wilms’ Tumour (WT1) Gene: Methods and Protocols is a valuable resource for anyone who is interested in the diverse methodologies used in WT1 research.

 

Editors and Affiliations

  • MRC Human Genetics Unit, University of Edinburgh, Edinburgh, United Kingdom

    Nicholas Hastie

About the editor



Bibliographic Information

  • Book Title: The Wilms' Tumor (WT1) Gene

  • Book Subtitle: Methods and Protocols

  • Editors: Nicholas Hastie

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-4939-4023-3

  • Publisher: Humana New York, NY

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media New York 2016

  • Hardcover ISBN: 978-1-4939-4021-9Published: 20 July 2016

  • Softcover ISBN: 978-1-4939-8156-4Published: 30 May 2018

  • eBook ISBN: 978-1-4939-4023-3Published: 14 July 2016

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: X, 235

  • Number of Illustrations: 8 b/w illustrations, 34 illustrations in colour

  • Topics: Cancer Research, Human Genetics

Buy it now

Buying options

eBook USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access