Skip to main content
  • Book
  • © 2016

Microarray Data Analysis

Methods and Applications

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts

Part of the book series: Methods in Molecular Biology (MIMB, volume 1375)

Buy it now

Buying options

eBook USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 159.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access

This is a preview of subscription content, log in via an institution to check for access.

Table of contents (17 protocols)

  1. Front Matter

    Pages i-xi
  2. Methods and Techniques for miRNA Data Analysis

    • Francesca Cristiano, Pierangelo Veltri
    Pages 11-23
  3. Bioinformatics and Microarray Data Analysis on the Cloud

    • Barbara Calabrese, Mario Cannataro
    Pages 25-39
  4. Classification and Clustering on Microarray Data for Gene Functional Prediction Using R

    • Liliana López Kleine, Rosa Montaño, Francisco Torres-Avilés
    Pages 41-54
  5. Querying Co-regulated Genes on Diverse Gene Expression Datasets Via Biclustering

    • Mehmet Deveci, Onur Küçüktunç, Kemal Eren, Doruk Bozdağ, Kamer Kaya, Ümit V. Çatalyürek
    Pages 55-74
  6. Analysis of Gene Expression Patterns Using Biclustering

    • Swarup Roy, Dhruba K. Bhattacharyya, Jugal K. Kalita
    Pages 91-103
  7. Ontology-Based Analysis of Microarray Data

    • Agapito Giuseppe, Marianna Milano
    Pages 117-121
  8. Integrating Microarray Data and GRNs

    • L. Koumakis, G. Potamias, M. Tsiknakis, M. Zervakis, V. Moustakis
    Pages 137-153
  9. A Protocol to Collect Specific Mouse Skeletal Muscles for Metabolomics Studies

    • Zhuohui Gan, Zhenxing Fu, Jennifer C. Stowe, Frank L. Powell, Andrew D. McCulloch
    Pages 169-179
  10. Functional Analysis of microRNA in Multiple Myeloma

    • Maria Teresa Di Martino, Nicola Amodio, Pierfrancesco Tassone, Pierosandro Tagliaferri
    Pages 181-194
  11. Microarray Analysis in Glioblastomas

    • Kaumudi M. Bhawe, Manish K. Aghi
    Pages 195-206
  12. Analysis of microRNA Microarrays in Cardiogenesis

    • Diego Franco, Fernando Bonet, Francisco Hernandez-Torres, Estefania Lozano-Velasco, Francisco J. Esteban, Amelia E. Aranega
    Pages 207-221
  13. Erratum to: Classification and Clustering on Microarray Data for Gene Functional Prediction Using R

    • Liliana López Kleine, Rosa Montaño, Francisco Torres-Avilés
    Pages 223-223
  14. Back Matter

    Pages 225-226

About this book

This volume covers a large area, from the description of methodologies for data analysis to the real application. Chapters focus on methodologies for preprocessing of microarray data, a survey of miRNA Data analysis, Cloud-based approaches, application of data mining techniques for data analysis, biclustering to query different datasets, web-based tool to analyze the evolution of miRNA clusters, application of biclustering to mine patterns of co-regulated genes ontologies, microarray and proteomic Data, Gene Regulatory Network Inference, Gene Regulatory Network methods, analysis of Mouse data for metabolomics studies, analysis of microRNA data in Multiple Myeloma, microarray data analysis in Gliobastomas, and microRNA data in Cardiogenesis.Written for the Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls.

Authoritative and practical, Microarray Data Analysis: Methods and Applications, Second Edition aims to ensure successful results in the further study of this vital field.

Editors and Affiliations

  • Department of Surgical and Medical Sciences, University “Magna Græcia” of Catanzaro, Catanzaro, Italy

    Pietro Hiram Guzzi

Bibliographic Information

  • Book Title: Microarray Data Analysis

  • Book Subtitle: Methods and Applications

  • Editors: Pietro Hiram Guzzi

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-4939-3173-6

  • Publisher: Humana New York, NY

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media, LLC, part of Springer Nature 2016

  • Hardcover ISBN: 978-1-4939-3172-9Published: 23 February 2016

  • Softcover ISBN: 978-1-4939-7993-6Published: 13 March 2019

  • eBook ISBN: 978-1-4939-3173-6Published: 22 February 2016

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 2

  • Number of Pages: XI, 226

  • Number of Illustrations: 15 b/w illustrations, 5 illustrations in colour

  • Topics: Bioinformatics

Buy it now

Buying options

eBook USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 159.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access