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Computer Analysis of Sequence Data, Part I

  • Book
  • © 1994

Overview

Part of the book series: Methods in Molecular Biology (MIMB, volume 24)

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Table of contents (29 protocols)

Keywords

About this book

DNA sequencing has become increasingly efficient over the years, resulting in an enormous increase in the amount of data gen- ated. In recent years, the focus of sequencing has shifted, from being the endpoint of a project, to being a starting point. This is especially true for such major initiatives as the human genome project, where vast tracts of DNA of unknown function are sequenced. This sheer volume of available data makes advanced computer methods ess- tial to analysis, and a familiarity with computers and sequence ana- sis software a vital requirement for the researcher involved with DNA sequencing. Even for nonsequencers, a familiarity with sequence analysis software can be important. For instance, gene sequences already present in the databases can be extremely useful in the design of cloning and genetic manipulation experiments. This two-part work on Analysis of Data is designed to be a practical aid to the researcher who uses computers for the acquisition, storage, or analysis of nucleic acid (and/or p- tein) sequences. Each chapter is written such that a competent sci- tist with basic computer literacy can carry out the procedure successfully at the first attempt by simply following the detailed pr- tical instructions that have been described by the author. A Notes section, which is included at the end of each chapter, provides advice on overcoming the common problems and pitfalls sometimes enco- tered by users of the sequence analysis software. Software packages for both the mainframe and personal computers are described.

Reviews

...the detailed program recipes...will provide a useful adjunct to user manuals.-Nature

Editors and Affiliations

  • Institute of Food Research, Norwich Research Park, Norwich, England

    Annette M. Griffin, Hugh G. Griffin

Bibliographic Information

  • Book Title: Computer Analysis of Sequence Data, Part I

  • Editors: Annette M. Griffin, Hugh G. Griffin

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1385/0896032469

  • Publisher: Humana Totowa, NJ

  • eBook Packages: Springer Protocols

  • Copyright Information: Humana Press 1994

  • Softcover ISBN: 978-0-89603-246-0Published: 23 February 1994

  • eBook ISBN: 978-1-59259-511-2Published: 02 February 2008

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XII, 372

  • Topics: Cell Biology

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