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Computational Genetic Regulatory Networks: Evolvable, Self-organizing Systems

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Part of the book series: Studies in Computational Intelligence (SCI, volume 428)

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Table of contents (7 chapters)

  1. Front Matter

    Pages 1-8
  2. Introduction

    • Johannes F. Knabe
    Pages 1-5
  3. Evolution

    • Johannes F. Knabe
    Pages 7-18
  4. Genetic Regulatory Networks

    • Johannes F. Knabe
    Pages 19-43
  5. Biological Clocks and Differentiation

    • Johannes F. Knabe
    Pages 45-70
  6. Topological Network Analysis

    • Johannes F. Knabe
    Pages 71-81
  7. Development and Morphogenesis

    • Johannes F. Knabe
    Pages 83-100
  8. Conclusions

    • Johannes F. Knabe
    Pages 101-106
  9. Back Matter

    Pages 0--1

About this book

Genetic Regulatory Networks (GRNs) in biological organisms are primary engines for cells to enact their engagements with environments, via incessant, continually active coupling. In differentiated multicellular organisms, tremendous complexity has arisen in the course of evolution of life on earth.

Engineering and science have so far achieved no working system that can compare with this complexity, depth and scope of organization.

Abstracting the dynamics of genetic regulatory control to a computational framework in which artificial GRNs in artificial simulated cells differentiate while connected in a changing topology, it is possible to apply Darwinian evolution in silico to study the capacity of such developmental/differentiated GRNs to evolve.

In this volume an evolutionary GRN paradigm is investigated for its evolvability and robustness in models of biological clocks, in simple differentiated multicellularity, and in evolving artificial developing 'organisms' which grow and express an ontogeny starting from a single cell interacting with its environment, eventually including a changing local neighbourhood of other cells.

These methods may help us understand the genesis, organization, adaptive plasticity, and evolvability of differentiated biological systems, and may also provide a paradigm for transferring these principles of biology's success to computational and engineering challenges at a scale not previously conceivable.

Reviews

From the reviews:

“I found this book interesting and engaging, even if brief and concise. … The content is largely about aspects of evolvability, adaptability, variability, and robustness of synthetic dynamic networks as computationally simulated. … I found this to be an enjoyable, brief volume with exciting content that is technically precise but highly accessible to advanced undergrads, as well as systems and computational biology researchers.” (Hector Zenil, Computing Reviews, August, 2013)

Authors and Affiliations

  • , Science and Technology Research Institut, University of Hertfordshire, Hatfield, United Kingdom

    Johannes F. Knabe

Bibliographic Information

  • Book Title: Computational Genetic Regulatory Networks: Evolvable, Self-organizing Systems

  • Authors: Johannes F. Knabe

  • Series Title: Studies in Computational Intelligence

  • DOI: https://doi.org/10.1007/978-3-642-30296-1

  • Publisher: Springer Berlin, Heidelberg

  • eBook Packages: Engineering, Engineering (R0)

  • Copyright Information: Springer Berlin Heidelberg 2013

  • Hardcover ISBN: 978-3-642-30295-4Published: 13 August 2012

  • Softcover ISBN: 978-3-642-44805-8Published: 20 September 2014

  • eBook ISBN: 978-3-642-30296-1Published: 14 August 2012

  • Series ISSN: 1860-949X

  • Series E-ISSN: 1860-9503

  • Edition Number: 1

  • Number of Pages: X, 122

  • Topics: Computational Intelligence, Artificial Intelligence

Buy it now

Buying options

eBook USD 84.99
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access