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Lecture Notes in Bioinformatics

Computational Methods in Systems Biology

International Conference CMSB 2004, Paris, France, May 26-28, 2004, Revised Selected Papers

Editors: Danos, Vincent, Schachter, Vincent (Eds.)

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About this book

The Computational Methods in Systems Biology (CMSB) workshop series was established in 2003 by Corrado Priami. The purpose of the workshop series is to help catalyze the convergence between computer scientists interested in language design, concurrency theory, software engineering or program verification, and physicists, mathematicians and biologists interested in the systems-level understanding of cellular processes. Systems biology was perceived as being increasingly in search of sophisticated modeling frameworks whether for representing and processing syst- level dynamics or for model analysis, comparison and refinement. One has here a clear-cut case of a must-explore field of application for the formal methods developed in computer science in the last decade. This proceedings consists of papers from the CMSB 2003 workshop. A good third of the 24 papers published here have a distinct formal methods origin; we take this as a confirmation that a synergy is building that will help solidify CMSB as a forum for cross-community exchange, thereby opening new theoretical avenues and making the field less of a potential application and more of a real one. Publication in Springer's new Lecture Notes in Bioinformatics (LNBI) offers particular visibility and impact, which we gratefully acknowledge. Our keynote speakers, Alfonso Valencia and Trey Ideker, gave challenging and somewhat humbling lectures: they made it clear that strong applications to systems biology are still some way ahead. We thank them all the more for accepting the invitation to speak and for the clarity and excitement they brought to the conference.

Table of contents (24 chapters)

  • An Explicit Upper Bound for the Approximation Ratio of the Maximum Gene Regulatory Network Problem

    Pozzi, Sergio (et al.)

    Pages 1-8

  • Autonomous Mobile Robot Control Based on White Blood Cell Chemotaxis

    Onsum, Matthew D. (et al.)

    Pages 9-19

  • Beta Binders for Biological Interactions

    Priami, Corrado (et al.)

    Pages 20-33

  • Biomimetic in Silico Devices

    Hunt, C. Anthony (et al.)

    Pages 34-42

  • Building and Analysing an Integrative Model of HIV-1 RNA Alternative Splicing

    Bockmayr, A. (et al.)

    Pages 43-57

Buy this book

eBook $74.99
price for USA (gross)
  • ISBN 978-3-540-25974-9
  • Digitally watermarked, DRM-free
  • Included format: PDF
  • ebooks can be used on all reading devices
  • Immediate eBook download after purchase
Softcover $99.00
price for USA
  • ISBN 978-3-540-25375-4
  • Free shipping for individuals worldwide
  • Usually dispatched within 3 to 5 business days.
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Bibliographic Information

Bibliographic Information
Book Title
Computational Methods in Systems Biology
Book Subtitle
International Conference CMSB 2004, Paris, France, May 26-28, 2004, Revised Selected Papers
Editors
  • Vincent Danos
  • Vincent Schachter
Series Title
Lecture Notes in Bioinformatics
Series Volume
3082
Copyright
2005
Publisher
Springer-Verlag Berlin Heidelberg
Copyright Holder
Springer-Verlag Berlin Heidelberg
eBook ISBN
978-3-540-25974-9
DOI
10.1007/b107287
Softcover ISBN
978-3-540-25375-4
Edition Number
1
Number of Pages
X, 282
Topics