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  • © 2012

Evolutionary Genomics

Statistical and Computational Methods, Volume 1

Editors:

  • Serves as an ideal reference for young and experienced researchers alike
  • Features practical, step-by-step guidance to methodologies being used in the field
  • Includes key implementation advice from the experts

Part of the book series: Methods in Molecular Biology (MIMB, volume 855)

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Table of contents (16 protocols)

  1. Front Matter

    Pages i-xiv
  2. Introduction: Bioinformatician’s Primers

    1. Front Matter

      Pages 1-1
    2. Diversity of Genome Organisation

      • Aidan Budd
      Pages 51-76
    3. Probability, Statistics, and Computational Science

      • Niko Beerenwinkel, Juliane Siebourg
      Pages 77-110
    4. The Essentials of Computational Molecular Evolution

      • Stéphane Aris-Brosou, Nicolas Rodrigue
      Pages 111-152
  3. Genomic Data Assembly, Alignment, and Homology Inference

    1. Front Matter

      Pages 153-153
    2. Gene Prediction

      • Tyler Alioto
      Pages 175-201
    3. Whole-Genome Alignment

      • Colin N. Dewey
      Pages 237-257
    4. Inferring Orthology and Paralogy

      • Adrian M. Altenhoff, Christophe Dessimoz
      Pages 259-279
    5. Detecting Laterally Transferred Genes

      • Rajeev K. Azad, Jeffrey G. Lawrence
      Pages 281-308
  4. Genome Evolution: Insights from Statistical Analyses

    1. Front Matter

      Pages 309-309
    2. Genome Evolution in Outcrossing Versus Selfing Versus Asexual Species

      • Sylvain Glémin, Nicolas Galtier
      Pages 311-335
    3. Transposable Elements and Their Identification

      • Wojciech Makałowski, Amit Pande, Valer Gotea, Izabela Makałowska
      Pages 337-359
    4. Analysis of Gene Order Evolution Beyond Single-Copy Genes

      • Nadia El-Mabrouk, David Sankoff
      Pages 397-429
    5. Discovering Patterns in Gene Order

      • Laxmi Parida, Niina Haiminen
      Pages 431-455

About this book

Together with early theoretical work in population genetics, the debate on sources of genetic makeup initiated by proponents of the neutral theory made a solid contribution to the spectacular growth in statistical methodologies for molecular evolution. Evolutionary Genomics: Statistical and Computational Methods is intended to bring together the more recent developments in the statistical methodology and the challenges that followed as a result of rapidly improving sequencing technologies.  Presented by top scientists from a variety of disciplines, the collection includes a wide spectrum of articles encompassing theoretical works and hands-on tutorials, as well as many reviews with key biological insight.  Volume 1 includes a helpful introductory section of bioinformatician primers followed by detailed chapters detailing genomic data assembly, alignment, and homology inference as well as insights into genome evolution from statistical analyses.  Written in the highly successful Methods in Molecular Biology™ series format, this work provides the kind of advice on methodology and implementation that is crucial for getting ahead in genomic data analyses.

 

Comprehensive and cutting-edge, Evolutionary Genomics: Statistical and Computational Methods is a treasure chest of state-of the-art methods to study genomic and omics data, certain to inspire both young and experienced readers to join the interdisciplinary field of evolutionary genomics.

Editors and Affiliations

  • Department of Computer Science, ETH Zürich, Zürich, Switzerland

    Maria Anisimova

Bibliographic Information

  • Book Title: Evolutionary Genomics

  • Book Subtitle: Statistical and Computational Methods, Volume 1

  • Editors: Maria Anisimova

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-61779-582-4

  • Publisher: Humana Totowa, NJ

  • eBook Packages: Springer Protocols

  • Copyright Information: Springer Science+Business Media, LLC 2012

  • Hardcover ISBN: 978-1-61779-581-7Published: 13 March 2012

  • Softcover ISBN: 978-1-4939-5908-2Published: 23 August 2016

  • eBook ISBN: 978-1-61779-582-4Published: 10 March 2012

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XIV, 467

  • Number of Illustrations: 78 b/w illustrations, 13 illustrations in colour

  • Topics: Human Genetics, Evolutionary Biology

Buy it now

Buying options

eBook USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access