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Methods in Molecular Biology

Protein Bioinformatics

From Protein Modifications and Networks to Proteomics

Editors: Wu, Cathy, Arighi, Cecilia, Ross, Karen (Eds.)

  • Includes cutting-edge methods and protocols
  • Provides step-by-step detail essential for reproducible results
  • Contains key notes and implementation advice from the experts
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eBook $109.00
price for USA (gross)
  • ISBN 978-1-4939-6783-4
  • Digitally watermarked, DRM-free
  • Included format: EPUB, PDF
  • ebooks can be used on all reading devices
  • Immediate eBook download after purchase
Hardcover $139.00
price for USA
  • ISBN 978-1-4939-6781-0
  • Free shipping for individuals worldwide
  • Usually dispatched within 3 to 5 business days.
About this book

This volume introduces bioinformatics research methods for proteins, with special focus on protein post-translational modifications (PTMs) and networks. This book is organized into four parts and covers the basic framework and major resources for analysis of protein sequence, structure, and function; approaches and resources for analysis of protein PTMs, protein-protein interactions (PPIs) and protein networks, including tools for PPI prediction and approaches for the construction of PPI and PTM networks; and bioinformatics approaches in proteomics, including computational methods for mass spectrometry-based proteomics and integrative analysis for alternative splice isoforms, for functional discovery. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory or computational protocols, and tips on troubleshooting and avoiding known pitfalls.

Cutting-edge and thorough, Protein Bioinformatics: From Protein Modifications and Networks to Proteomics is a valuable resource for readers who wish to learn about state-of-the-art bioinformatics databases and tools, novel computational methods, and future trends in protein and proteomic data analysis in systems biology. This book is useful to researchers who work in the biotechnology and pharmaceutical industries, and in various academic departments, such as biological and medical sciences and computer sciences and engineering.

Table of contents (22 chapters)

  • Protein Bioinformatics Databases and Resources

    Chen, Chuming (et al.)

    Pages 3-39

  • UniProt Protein Knowledgebase

    Pundir, Sangya (et al.)

    Pages 41-55

  • Tutorial on Protein Ontology Resources

    Arighi, Cecilia N. (et al.)

    Pages 57-78

  • CATH-Gene3D: Generation of the Resource and Its Use in Obtaining Structural and Functional Annotations for Protein Sequences

    Dawson, Natalie L. (et al.)

    Pages 79-110

  • Structure-Based Virtual Screening

    Li, Qingliang (et al.)

    Pages 111-124

Buy this book

eBook $109.00
price for USA (gross)
  • ISBN 978-1-4939-6783-4
  • Digitally watermarked, DRM-free
  • Included format: EPUB, PDF
  • ebooks can be used on all reading devices
  • Immediate eBook download after purchase
Hardcover $139.00
price for USA
  • ISBN 978-1-4939-6781-0
  • Free shipping for individuals worldwide
  • Usually dispatched within 3 to 5 business days.
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Bibliographic Information

Bibliographic Information
Book Title
Protein Bioinformatics
Book Subtitle
From Protein Modifications and Networks to Proteomics
Editors
  • Cathy Wu
  • Cecilia Arighi
  • Karen Ross
Series Title
Methods in Molecular Biology
Series Volume
1558
Copyright
2017
Publisher
Humana Press
Copyright Holder
Springer Science+Business Media LLC
eBook ISBN
978-1-4939-6783-4
DOI
10.1007/978-1-4939-6783-4
Hardcover ISBN
978-1-4939-6781-0
Series ISSN
1064-3745
Edition Number
1
Number of Pages
XIV, 472
Number of Illustrations and Tables
3 b/w illustrations, 127 illustrations in colour
Topics