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  • Book
  • © 2013

Genomics of the Saccharinae

  • Covers all aspects of the Saccharinae
  • All chapters are written by experts in their fields
  • Includes unique illustrations and photographs
  • Includes supplementary material: sn.pub/extras

Part of the book series: Plant Genetics and Genomics: Crops and Models (PGG, volume 11)

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Table of contents (23 chapters)

  1. Front Matter

    Pages i-xvi
  2. Natural History and Genetic Diversity

    1. Front Matter

      Pages 1-1
  3. Natural History and Genetic Diversity

    1. The Gene Pool of Sorghum bicolor and Its Improvement

      • Clarissa T. Kimber, Jeff A. Dahlberg, Stephen Kresovich
      Pages 23-41
    2. The Gene Pool of Saccharum Species and Their Improvement

      • Andrew H. Paterson, Paul H. Moore, Tom L. Tew
      Pages 43-71
    3. The Gene Pool of Miscanthus Species and Its Improvement

      • Erik J. Sacks, John A. Juvik, Qi Lin, J. Ryan Stewart, Toshihiko Yamada
      Pages 73-101
  4. Genomic Tools, Resources and Approaches

    1. Front Matter

      Pages 103-103
  5. Genomic Tools, Resources and Approaches.

    1. Transcriptome Analysis in the Saccharinae

      • Milton Yutaka Nishiyama Jr, Fabio Vicente, Paloma Mieko Sato, Savio Siqueira Ferreira, Frank Alex Feltus, Glaucia Mendes Souza
      Pages 121-139
    2. Sorghum and Sugarcane Proteomics

      • Bongani Kaiser Ndimba, Rudo Ngara
      Pages 141-168
    3. Gene Mutagenesis Systems and Resources for the Saccharinae

      • Zhanguo Xin, Ming-Li Wang, Surinder Chopra, Pohao Wang
      Pages 169-185
    4. Association Genetics Strategies and Resources

      • Jianming Yu, Martha T. Hamblin, Mitchell R. Tuinstra
      Pages 187-203
    5. Sorghum Transformation: Overview and Utility

      • Tejinder Kumar, Arlene Howe, Shirley Sato, Ismail Dweikat, Tom Clemente
      Pages 205-221
    6. Genetic Engineering of Saccharum

      • Getu Beyene, Ian S. Curtis, Mona B. Damaj, Marco T. Buenrostro-Nava, T. Erik Mirkov
      Pages 223-254
    7. Genetic Engineering of Miscanthus

      • Dean Engler, Katrin Jakob
      Pages 255-301
    8. Saccharinae Bioinformatics Resources

      • Alan R. Gingle, F. Alex Feltus
      Pages 303-330
  6. Bridging Classical and Genomic Investigations of Sorghum Biology

    1. Front Matter

      Pages 331-331
  7. Bridging Classical and Genomic Investigations of Sorghum Biology

    1. Bridging Classical and Molecular Genetics of Sorghum Plant Stature and Maturity

      • Patrick J. Brown, Andrew H. Paterson
      Pages 333-345
    2. Bridging Conventional and Molecular Genetics of Sorghum Insect Resistance

      • Yinghua Huang, Hari C. Sharma, Mukesh K. Dhillon
      Pages 367-389

About this book

The Saccharinae clade of the Poaceae (grass) family of flowering plants includes several important crops with a rich history of contributions to humanity and the promise of still-greater contributions, as a result of some of the highest biomass productivity levels known, resilience to drought and other environmental challenges that are likely to increase, amenability to production systems that may mitigate or even reverse losses of ecological capital such as topsoil erosion, and the recent blossoming of sorghum as a botanical and genomic model for the clade. 

In Genomics of the Saccharinae, advances of the past decade and earlier are summarized and synthesized to elucidate the current state of knowledge of the structure, function, and evolution of the Sorghum, Saccharum, and Miscanthus genera, and progress in the application of this knowledge to crop improvement.  As a backdrop, it is important to understand the naturally occurring diversity in each genus, its organization and distribution, and its evolutionary history. Genomic tools and methods for Saccharinae biology and improvement have improved dramatically in the past few years – a detailed summary of these tools and their applications is a central element of this book.  Application of genomic tools to priorities in crop improvement, including understanding and manipulating plant growth and development, composition, and defense, as well as increasing the quality and productivity of seed/grain, sugar, biomass, and other value-added products under a range of conditions and inputs, are addressed. In particular, as the first native African crop to emerge as a genomic model, sorghum offers an excellent case study of challenges and opportunities in linking new advances in biosciences to solving some of Africa’s major agricultural problems. Several members of the clade, exemplified by Sorghum halepense (Johnsongrass) offer insights into weediness and invasion biology. The firstsequence for a member of the clade, sorghum, as well as progress and challenges toward sequencing of additional members and the new opportunities that this will create, are also explored. Indeed, the very complexities that have hindered study of some clade members also offer intriguing opportunities to gain insight into fundamental questions such as roles of polyploidy in agricultural productivity and post-polyploidy evolution.

Reviews

From the reviews:

“Insightful review of the current state of knowledge and research on genome analysis of these crops, and sorghum particularly. … this book provides some good in-depth reviews and commentary for those interested in genome analysis of sorghum and some good overviews of activity in certain molecular genetics research fields in sorghum, sugarcane and Miscanthus.” (Phil Jackson, Experimental Agriculture, Vol. 49 (2), 2013)

Editors and Affiliations

  • Plant Genome Mapping Laboratory, Departments of Crop and Soil Science,, University of Georgia, Athens, USA

    Andrew H. Paterson

Bibliographic Information

Buy it now

Buying options

eBook USD 169.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 229.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access