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  • Textbook
  • © 2019

Genome Data Analysis

Authors:

  • Describes recent advances in genomics and bioinformatics
  • Provides numerous examples of genome data analysis
  • Meets the needs of life scientists, medical scientists, and others who are new to the field of bioinformatics

Part of the book series: Learning Materials in Biosciences (LMB)

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Table of contents (21 chapters)

  1. Front Matter

    Pages i-xvi
  2. Bioinformatics for Life and Personal Genome Interpretation

    1. Front Matter

      Pages 1-1
    2. Bioinformatics for Life

      • Ju Han Kim
      Pages 3-15
    3. Personal Genome Data Analysis

      • Ju Han Kim
      Pages 33-45
  3. Advanced Microarray Data Analysis

    1. Front Matter

      Pages 77-77
    2. Advanced Microarray Data Analysis

      • Ju Han Kim
      Pages 79-93
    3. Gene Expression Data Analysis

      • Ju Han Kim
      Pages 95-120
    4. MicroRNA Data Analysis

      • Ju Han Kim
      Pages 159-172
  4. Network Biology, Sequence, Pathway and Ontology Informatics

    1. Front Matter

      Pages 173-173
    2. Motif and Regulatory Sequence Analysis

      • Ju Han Kim
      Pages 189-211
    3. Molecular Pathways and Gene Ontology

      • Ju Han Kim
      Pages 213-232
    4. Biological Network Analysis

      • Ju Han Kim
      Pages 233-246
  5. SNPS, GWAS and CNVS, Informatics for Genome Variants

    1. Front Matter

      Pages 247-247
    2. SNP Data Analysis

      • Ju Han Kim
      Pages 261-280

About this book

This textbook describes recent advances in genomics and bioinformatics and provides numerous examples of genome data analysis that illustrate its relevance to real world problems and will improve the reader’s bioinformatics skills. Basic data preprocessing with normalization and filtering, primary pattern analysis, and machine learning algorithms using R and Python are demonstrated for gene-expression microarrays, genotyping microarrays, next-generation sequencing data, epigenomic data, and biological network and semantic analyses. In addition, detailed attention is devoted to integrative genomic data analysis, including multivariate data projection, gene-metabolic pathway mapping, automated biomolecular annotation, text mining of factual and literature databases, and integrated management of biomolecular databases.

The textbook is primarily intended for life scientists, medical scientists, statisticians, data processing researchers, engineers, and other beginners in bioinformatics who are experiencing difficulty in approaching the field. However, it will also serve as a simple guideline for experts unfamiliar with the new, developing subfield of genomic analysis within bioinformatics.

Authors and Affiliations

  • Division of Biomedical Informatics, Seoul National University College of Medicine, Seoul, Korea (Republic of)

    Ju Han Kim

About the author

Professor. Ju Han Kim, Division of Biomedical Informatics, Seoul National University College of Medicine, Seoul , South Korea.


Bibliographic Information

Buy it now

Buying options

eBook USD 79.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 99.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access