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Computational Advances in Bio and Medical Sciences

10th International Conference, ICCABS 2020, Virtual Event, December 10-12, 2020, Revised Selected Papers

  • Conference proceedings
  • © 2021

Overview

Editors:
  1. Sumit Kumar Jha

    1. The University of Texas at San Antonio, San Antonio, USA

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  2. Ion Măndoiu

    1. University of Connecticut, Storrs, USA

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  3. Sanguthevar Rajasekaran

    1. University of Connecticut, Storrs Mansfield, USA

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  4. Pavel Skums

    1. Department of Computer Science, Georgia State University, Roswell, USA

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  5. Alex Zelikovsky

    1. Department of Computer Science, Georgia State University, Atlanta, USA

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 12686)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Included in the following conference series:

Conference proceedings info: ICCABS 2020.

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Table of contents (11 papers)

  1. Front Matter

    Pages i-x
    Download chapter PDF

  2. Computational Advances in Bio and Medical Sciences

    1. Front Matter

      Pages 1-1
      Download chapter PDF

    2. DNA Read Feature Importance Using Machine Learning for Read Alignment Categories

      • Jacob S. Porter
      Pages 3-14

    3. MetaProb 2: Improving Unsupervised Metagenomic Binning with Efficient Reads Assembly Using Minimizers

      • F. Andreace, C. Pizzi, M. Comin
      Pages 15-25

    4. Computational Study of Action Potential Generation in Urethral Smooth Muscle Cell

      • Chitaranjan Mahapatra
      Pages 26-32

    5. Metabolic Pathway Prediction using Non-negative Matrix Factorization with Improved Precision

      • Abdur Rahman Mohd Abul Basher, Ryan J. McLaughlin, Steven J. Hallam
      Pages 33-44

    6. A Novel Pathway Network Analytics Method Based on Graph Theory

      • Subrata Saha, Ahmed Soliman, Sanguthevar Rajasekaran
      Pages 45-55

    7. Latent Variable Modelling and Variational Inference for scRNA-seq Differential Expression Analysis

      • Joana Godinho, Alexandra M. Carvalho, Susana Vinga
      Pages 56-68

  3. Computational Advances for Single-Cell Omics Data Analysis

    1. Front Matter

      Pages 69-69
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    2. Computational Cell Cycle Analysis of Single Cell RNA-Seq Data

      • Marmar Moussa, Ion I. Măndoiu
      Pages 71-87

    3. Single-Cell Gene Regulatory Network Analysis Reveals Potential Mechanisms of Action of Antimalarials Against SARS-CoV-2

      • James J. Cai, Daniel Osorio
      Pages 88-94

  4. Computational Advances for Next Generation Sequencing

    1. Front Matter

      Pages 95-95
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    2. RACCROCHE: Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-occurrences

      • Qiaoji Xu, Lingling Jin, Chunfang Zheng, James H. Leebens Mack, David Sankoff
      Pages 97-115

    3. A Fast Word Embedding Based Classifier to Profile Target Gene Databases in Metagenomic Samples

      • G. A. Arango-Argoty, L. S. Heath, A. Pruden, P. J. Vikesland, L. Zhang
      Pages 116-126

    4. Clustering Based Identification of SARS-CoV-2 Subtypes

      • Andrew Melnyk, Fatemeh Mohebbi, Sergey Knyazev, Bikram Sahoo, Roya Hosseini, Pavel Skums et al.
      Pages 127-141

  5. Back Matter

    Pages 143-143
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Other volumes

  1. Computational Advances in Bio and Medical Sciences

Keywords

About this book

This book constitutes the proceedings of the 10th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2020, held in December 2020. Due to COVID-19 pandemic the conference was held virtually.

The 6 regular and 5 invited papers presented in this book were carefully reviewed and selected from 16 submissions. The use of high throughput technologies is fundamentally changing the life sciences and leading to the collection of large amounts of biological and medical data. The papers show how the use of this data can help expand our knowledge of fundamental biological processes and improve human health - using novel computational models and advanced analysis algorithms.

Editors and Affiliations

  • The University of Texas at San Antonio, San Antonio, USA

    Sumit Kumar Jha

  • University of Connecticut, Storrs, USA

    Ion Măndoiu

  • University of Connecticut, Storrs Mansfield, USA

    Sanguthevar Rajasekaran

  • Department of Computer Science, Georgia State University, Roswell, USA

    Pavel Skums

  • Department of Computer Science, Georgia State University, Atlanta, USA

    Alex Zelikovsky

Bibliographic Information

  • Book Title: Computational Advances in Bio and Medical Sciences

  • Book Subtitle: 10th International Conference, ICCABS 2020, Virtual Event, December 10-12, 2020, Revised Selected Papers

  • Editors: Sumit Kumar Jha, Ion Măndoiu, Sanguthevar Rajasekaran, Pavel Skums, Alex Zelikovsky

  • Series Title: Lecture Notes in Computer Science

  • DOI: https://doi.org/10.1007/978-3-030-79290-9

  • Publisher: Springer Cham

  • eBook Packages: Computer Science, Computer Science (R0)

  • Copyright Information: Springer Nature Switzerland AG 2021

  • Softcover ISBN: 978-3-030-79289-3Published: 03 July 2021

  • eBook ISBN: 978-3-030-79290-9Published: 02 July 2021

  • Series ISSN: 0302-9743

  • Series E-ISSN: 1611-3349

  • Edition Number: 1

  • Number of Pages: X, 143

  • Number of Illustrations: 6 b/w illustrations, 30 illustrations in colour

  • Topics: Computer Applications, Special Purpose and Application-Based Systems, Computer Communication Networks

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