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Computer Science - Theoretical Computer Science | Transactions on Computational Systems Biology VI

Transactions on Computational Systems Biology VI

Editor-in-chief: Priami, Corrado
Plotkin, Gordon (Ed.)

2006, VII, 247p. Also available online.

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  • About this book

  • Features contributions initially presented at the 2005 IEEE International Conference on Granular Computing
  • Special edited by Gordon Plotkin
  • Includes 9 papers devoted to various aspects of computational methods, algorithm and techniques in bioinformatics

The LNCS journal Transactions on Computational Systems Biology is devoted to inter- and multidisciplinary research in the fields of computer science and life sciences and supports a paradigmatic shift in the techniques from computer and information science to cope with the new challenges arising from the systems oriented point of view of biological phenomena.

This, the 5th Transactions on Computational Systems Biology volume, edited by Gordon Plotkin, features some carefully selected and enhanced contributions initially presented at the 2005 IEEE International Conference on Granular Computing held in Beijing, China, in July 2005.

The 9 papers selected for this special issue are devoted to various aspects of computational methods, algorithm and techniques in bioinformatics such as gene expression analysis, biomedical literature mining and natural language processing, protein structure prediction, biological database management and biomedical information retrieval.

Content Level » Research

Keywords » algorithms - bioinformatics - biological networks - brane calculi - complexity - computational biology - computational systems biology - computer - computer science - gene networks - genetic networks - genetic regulatory networks - model checking - petr - verification

Related subjects » Life Sciences - Systems Biology and Bioinformatics - Theoretical Computer Science

Table of contents 

Property-Driven Statistics of Biological Networks.- On the Computational Power of Brane Calculi.- Analysis of Signalling Pathways Using Continuous Time Markov Chains.- Machine Learning Biochemical Networks from Temporal Logic Properties.- Qualitative Petri Net Modelling of Genetic Networks.- Simulating Bacterial Transcription and Translation in a Stochastic ? Calculus.- Automated Abstraction Methodology for Genetic Regulatory Networks.- P Systems, a New Computational Modelling Tool for Systems Biology.- Equivalence of Metabolite Fragments and Flow Analysis of Isotopomer Distributions for Flux Estimation.- Multiple Representations of Biological Processes.

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