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Applications of Evolutionary Computing

EvoWorkshops 2006: EvoBIO, EvoCOMNET, EvoHOT, EvoIASP, EvoINTERACTION, EvoMUSART, and EvoSTOC, Budapest, Hungary, April 10-12, 2006, Proceedings

  • Conference proceedings
  • © 2006

Overview

Editors:
  1. Franz Rothlauf

    1. Johannes Gutenberg University, Mainz, Germany

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  2. Jürgen Branke

    1. Institute AIFB, University of Karlsruhe, Karlsruhe, Germany

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  3. Stefano Cagnoni

    1. Dipartimento di Ingegneria dell’Informazione, Università di Parma,  

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  4. Ernesto Costa

    1. Centre of Informatics and Systems of the University of Coimbra,  

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  5. Carlos Cotta

    1. Dept. LCC, Universidad de Málaga, Spain

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  6. Rolf Drechsler

    1. Institute of Computer Science, University of Bremen, Bremen, Germany

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  7. Evelyne Lutton

    1. INRIA Saclay - Ile-de-France, Parc Orsay Université, ORSAY Cedex, France

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  8. Penousal Machado

    1. CISUC, Department of Informatics Engineering, University of Coimbra, Polo II of the University of Coimbra, Coimbra, Portugal

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  9. Jason H. Moore

    1. Dartmouth College, Lebanon, USA

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  10. Juan Romero

    1. Universidade de A Coruña, A Coruña, Spain

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  11. George D. Smith

    1. School of Computing Sciences, UEA Norwich, University of East Anglia, Norwich, UK

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  12. Giovanni Squillero

    1. Dipartimento di Automatica e Informatica, Politecnico di Torino, Italy

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  13. Hideyuki Takagi

    1. Kyushu University, Japan

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Part of the book series: Lecture Notes in Computer Science (LNCS, volume 3907)

Part of the book sub series: Theoretical Computer Science and General Issues (LNTCS)

Included in the following conference series:

Conference proceedings info: EvoWorkshops 2006.

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Table of contents (78 papers)

  1. Front Matter

    Download chapter PDF

  2. EvoBIO Contributions

    1. Functional Classification of G-Protein Coupled Receptors, Based on Their Specific Ligand Coupling Patterns

      • Burcu Bakir, Osman Ugur Sezerman
      Pages 1-12

    2. Incorporating Biological Domain Knowledge into Cluster Validity Assessment

      • Nadia Bolshakova, Francisco Azuaje, Pádraig Cunningham
      Pages 13-22

    3. A Novel Mathematical Model for the Optimization of DNA–Chip Design and Its Implementation

      • Kornélia Danyi, Gabriella Kókai, József Csontos
      Pages 23-33

    4. A Hybrid GA/SVM Approach for Gene Selection and Classification of Microarray Data

      • Edmundo Bonilla Huerta, Béatrice Duval, Jin-Kao Hao
      Pages 34-44

    5. Multi-stage Evolutionary Algorithms for Efficient Identification of Gene Regulatory Networks

      • Kee-Young Kim, Dong-Yeon Cho, Byoung-Tak Zhang
      Pages 45-56

    6. Human Papillomavirus Risk Type Classification from Protein Sequences Using Support Vector Machines

      • Sun Kim, Byoung-Tak Zhang
      Pages 57-66

    7. Hierarchical Clustering, Languages and Cancer

      • Pritha Mahata, Wagner Costa, Carlos Cotta, Pablo Moscato
      Pages 67-78

    8. Robust SVM-Based Biomarker Selection with Noisy Mass Spectrometric Proteomic Data

      • Elena Marchiori, Connie R. Jimenez, Mikkel West-Nielsen, Niels H. H. Heegaard
      Pages 79-90

    9. On the Use of Variable Complementarity for Feature Selection in Cancer Classification

      • Patrick E. Meyer, Gianluca Bontempi
      Pages 91-102

    10. Comparison of Neural Network Optimization Approaches for Studies of Human Genetics

      • Alison A. Motsinger, Scott M. Dudek, Lance W. Hahn, Marylyn D. Ritchie
      Pages 103-114

    11. Obtaining Biclusters in Microarrays with Population-Based Heuristics

      • Pablo Palacios, David Pelta, Armando Blanco
      Pages 115-126

    12. Multiple Sequence Alignment Based on Set Covers

      • Alexandre H. L. Porto, Valmir C. Barbosa
      Pages 127-137

    13. A Methodology for Determining Amino-Acid Substitution Matrices from Set Covers

      • Alexandre H. L. Porto, Valmir C. Barbosa
      Pages 138-148

    14. Multi-Objective Evolutionary Algorithm for Discovering Peptide Binding Motifs

      • Menaka Rajapakse, Bertil Schmidt, Vladimir Brusic
      Pages 149-158

    15. Mining Structural Databases: An Evolutionary Multi-Objetive Conceptual Clustering Methodology

      • R. Romero-Zaliz, C. Rubio-Escudero, O. Cordón, O. Harari, C. del Val, I. Zwir
      Pages 159-171

    16. Optimal Selection of Microarray Analysis Methods Using a Conceptual Clustering Algorithm

      • C. Rubio-Escudero, R. Romero-Záliz, O. Cordón, O. Harari, C. del Val, I. Zwir
      Pages 172-183

    17. Microarray Probe Design Using ε-Multi-Objective Evolutionary Algorithms with Thermodynamic Criteria

      • Soo-Yong Shin, In-Hee Lee, Byoung-Tak Zhang
      Pages 184-195

    18. An Algorithm for the Automated Verification of DNA Supercontig Assemblies

      • Nikola Stojanovic
      Pages 196-207

    19. From HP Lattice Models to Real Proteins: Coordination Number Prediction Using Learning Classifier Systems

      • Michael Stout, Jaume Bacardit, Jonathan D. Hirst, Natalio Krasnogor, Jacek Blazewicz
      Pages 208-220
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  1. Applications of Evolutionary Computing

Keywords

Editors and Affiliations

  • Johannes Gutenberg University, Mainz, Germany

    Franz Rothlauf

  • Institute AIFB, University of Karlsruhe, Karlsruhe, Germany

    Jürgen Branke

  • Dipartimento di Ingegneria dell’Informazione, Università di Parma,  

    Stefano Cagnoni

  • Centre of Informatics and Systems of the University of Coimbra,  

    Ernesto Costa

  • Dept. LCC, Universidad de Málaga, Spain

    Carlos Cotta

  • Institute of Computer Science, University of Bremen, Bremen, Germany

    Rolf Drechsler

  • INRIA Saclay - Ile-de-France, Parc Orsay Université, ORSAY Cedex, France

    Evelyne Lutton

  • CISUC, Department of Informatics Engineering, University of Coimbra, Polo II of the University of Coimbra, Coimbra, Portugal

    Penousal Machado

  • Dartmouth College, Lebanon, USA

    Jason H. Moore

  • Universidade de A Coruña, A Coruña, Spain

    Juan Romero

  • School of Computing Sciences, UEA Norwich, University of East Anglia, Norwich, UK

    George D. Smith

  • Dipartimento di Automatica e Informatica, Politecnico di Torino, Italy

    Giovanni Squillero

  • Kyushu University, Japan

    Hideyuki Takagi

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