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Formal Methods in Macro-Biology

First International Conference, FMMB 2014, Noumea, New Caledonia, September 22-14, 2014, Proceedings

  • Conference proceedings
  • © 2014

Overview

Editors:
  1. François Fages

    1. Inria,, Rocquencourt, France

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  2. Carla Piazza

    1. Department of Mathematics and Computer Science, University of Udine, Udine, Italy

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    You can also search for this editor in PubMed   Google Scholar

Part of the book series: Lecture Notes in Computer Science (LNCS, volume 8738)

Part of the book sub series: Lecture Notes in Bioinformatics (LNBI)

Included in the following conference series:

Conference proceedings info: FMMB 2014.

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Table of contents (15 papers)

  1. Front Matter

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  3. Regular Papers

    1. Control of a Bioreactor with Quantized Measurements

      • Francis Mairet, Jean-Luc Gouzé
      Pages 47-62

    2. External Interactions on Hybrid Models of Biological Systems

      • Alberto Casagrande, Carla Piazza
      Pages 63-81

    3. Attractor Equivalence: An Observational Semantics for Reaction Networks

      • Guillaume Madelaine, Cédric Lhoussaine, Joachim Niehren
      Pages 82-101

    4. Petri Nets Are a Biologist’s Best Friend

      • Nicola Bonzanni, K. Anton Feenstra, Wan Fokkink, Jaap Heringa
      Pages 102-116

    5. 50 Shades of Rule Composition

      • Jakob Lykke Andersen, Christoph Flamm, Daniel Merkle, Peter F. Stadler
      Pages 117-135

    6. A Logical Framework for Systems Biology

      • Elisabetta de Maria, Joëlle Despeyroux, Amy P. Felty
      Pages 136-155

    7. Disentangling the Effects of Habitat and Protection on Coral Reef Fish Communities in Long-Established Marine Reserves

      • Dominique Pelletier, Delphine Mallet, Abigail Powel, William Roman
      Pages 156-158

    8. The Challenges of Developing Spatially Explicit Network Models for the Management of Disease Vectors in Ecological Systems

      • Brendan Trewin, Hazel Parry, Myron Zalucki, David Westcott, Nancy Shellhorn
      Pages 159-161

    9. Evaluating Management Scenarios for Fished Resources of the New Caledonian Lagoon Using a Spatially-Explicit Model

      • Bastien Preuss, Dominique Pelletier, Laurent Wantiez
      Pages 162-164

    10. Completing SBGN-AF Networks by Logic-Based Hypothesis Finding

      • Yoshitaka Yamamoto, Adrien Rougny, Hidetomo Nabeshima, Katsumi Inoue, Hisao Moriya, Christine Froidevaux et al.
      Pages 165-179

  4. Erratum

    1. Erratum: Disentangling the Effects of Habitat and Protection on Coral Reef Fish Communities in Long-Established Marine Reserves

      • Dominique Pelletier, Delphine Mallet, Abigail Powell, William Roman
      Pages E1-E1

  5. Back Matter

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  1. Formal Methods in Macro-Biology

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About this book

This book constitutes the refereed proceedings of the First International Conference on Formal Methods in Macro-Biology, FMMB 2014, held in Nouméa, New Caledonia, in September 2014.
The 7 revised full and 3 short papers presented together with 7 invited presentations were carefully reviewed and selected from 17 submissions. The scientific program consists of papers on a wide variety of topics, including ecological systems, medical applications, logical frameworks, and discrete continuous and hybrid models for the analysis of biological systems at macroscopic levels.

Editors and Affiliations

  • Inria,, Rocquencourt, France

    François Fages

  • Department of Mathematics and Computer Science, University of Udine, Udine, Italy

    Carla Piazza

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