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  • Open Access
  • © 2015

Low-Cost Methods for Molecular Characterization of Mutant Plants

Tissue Desiccation, DNA Extraction and Mutation Discovery: Protocols

  • Open Access provided with a grant from the International Atomic Energy Agency
  • Describes low-cost and easy-to-use assays for the molecular characterization of mutant plant material
  • The experimental protocols do away with the need for complicated procedures, expensive equipment and hazardous chemicals
  • All protocols included have been tried and tested by researchers all over the world
  • Includes supplementary material: sn.pub/extras

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Table of contents (9 chapters)

  1. Front Matter

    Pages i-x
  2. Introduction

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 1-4Open Access
  3. Health and Safety Considerations

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 5-7Open Access
  4. Sample Collection and Storage

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 9-11Open Access
  5. Low-Cost DNA Extraction

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 13-17Open Access
  6. PCR Amplification for Low-Cost Mutation Discovery

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 19-20Open Access
  7. Enzymatic Mismatch Cleavage and Agarose Gel Evaluation of Samples

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 21-22Open Access
  8. Alternative Enzymology for Mismatch Cleavage for TILLING and Ecotilling: Extraction of Enzymes from Common Weedy Plants

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 23-26Open Access
  9. Example Data

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 27-33Open Access
  10. Conclusions

    • Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger
    Pages 35-35Open Access

About this book

This book offers low-cost and rapid molecular assays for the characterization of mutant plant germplasm. Detailed protocols are provided for the desiccation of plant tissues; the extraction of high-quality DNA for downstream applications; the extraction of single-strand-specific nucleases for single nucleotide polymorphism; and small insertion/deletion discovery using standard agarose gel electrophoresis. The methods described can be applied in any laboratory equipped for basic molecular biology and do away with the need for expensive freezers and toxic organic compounds. With the appropriate validation of sample quality and longevity, they can provide sufficient DNA for a variety of molecular applications, such as marker studies and TILLING, at approximately one tenth of the cost per sample when compared to commercial kits.

Authors and Affiliations

  • Plant Breeding and Genetics Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Vienna, Austria

    Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Bernhard J. Hofinger

  • Agricultural Research Corporation, Khartoum North, Sudan

    Mayada M. Beshir

  • School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, USA

    Robert G. Laport

Bibliographic Information

  • Book Title: Low-Cost Methods for Molecular Characterization of Mutant Plants

  • Book Subtitle: Tissue Desiccation, DNA Extraction and Mutation Discovery: Protocols

  • Authors: Bradley J. Till, Joanna Jankowicz-Cieslak, Owen A. Huynh, Mayada M. Beshir, Robert G. Laport, Bernhard J. Hofinger

  • DOI: https://doi.org/10.1007/978-3-319-16259-1

  • Publisher: Springer Cham

  • eBook Packages: Biomedical and Life Sciences, Biomedical and Life Sciences (R0)

  • Copyright Information: The Editor(s) (if applicable) and the Author(s) 2015

  • Hardcover ISBN: 978-3-319-16258-4Due: 09 June 2015

  • Softcover ISBN: 978-3-319-38667-6Published: 17 October 2016

  • eBook ISBN: 978-3-319-16259-1Published: 08 May 2015

  • Edition Number: 1

  • Number of Pages: X, 38

  • Number of Illustrations: 6 b/w illustrations, 3 illustrations in colour

  • Topics: Plant Breeding/Biotechnology, Biological Techniques, Nucleic Acid Chemistry

Societies and partnerships

Buy it now

Buying options

Softcover Book USD 59.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 59.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access