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Immunoinformatics

Predicting Immunogenicity In Silico

  • Book
  • © 2007

Overview

  • Addresses databases, HLA supertypes, MCH binding, and other properties of immune systems
  • A firm background for anyone working in immunoinformatics
  • Chapters written by leaders in the field

Part of the book series: Methods in Molecular Biology (MIMB, volume 409)

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Table of contents (31 protocols)

  1. Immunoinformatics and the in Silico Prediction of Immunogenicity

  2. Databases

  3. Defining HLA Supertypes

  4. Predicting Peptide-MHC Binding

Keywords

About this book

Immunoinformatics: Predicting Immunogenicity In Silico is a primer for researchers interested in this emerging and exciting technology and provides examples in the major areas within the field of immunoinformatics. This volume both engages the reader and provides a sound foundation for the use of immunoinformatics techniques in immunology and vaccinology.

The volume is conveniently divided into four sections. The first section, Databases, details various immunoinformatic databases, including IMGT/HLA, IPD, and SYEPEITHI. In the second section, Defining HLA Supertypes, authors discuss supertypes of GRID/CPCA and hierarchical clustering methods, Hla-Ad supertypes, MHC supertypes, and Class I Hla Alleles. The third section, Predicting Peptide-MCH Binding, includes discussions of MCH binders, T-Cell epitopes, Class I and II Mouse Major Histocompatibility, and HLA-peptide binding. Within the fourth section, Predicting Other Properties of Immune Systems, investigators outline TAP binding, B-cell epitopes, MHC similarities, and predicting virulence factors of immunological interest.

Immunoinformatics: Predicting Immunogenicity In Silico merges skill sets of the lab-based and the computer-based science professional into one easy-to-use, insightful volume.

Reviews

"Investigators considering problems of recombinant vaccine design, possible host responses, and how to select likely sites from a large pool of information (the protein of interest) will find valuable material here." -Doody's Book Review, Weighted Numerical Score:77 - 3 Stars

"...a value to virtually any investigator in this general field." -Doody's Book Review, Weighted Numerical Score:77 - 3 Stars

 

"...a valuable addition to libraries in universities and research institutes, R & D firms engaged in the development of vaccines and immunotherapeutics, and clinical research centres." -Immunology news

Editors and Affiliations

  • The Jenner Institute, University of Oxford, Berkshire, UK

    Darren R. Flower

Bibliographic Information

  • Book Title: Immunoinformatics

  • Book Subtitle: Predicting Immunogenicity In Silico

  • Editors: Darren R. Flower

  • Series Title: Methods in Molecular Biology

  • DOI: https://doi.org/10.1007/978-1-60327-118-9

  • Publisher: Humana Totowa, NJ

  • eBook Packages: Springer Protocols

  • Copyright Information: Humana Press 2007

  • Hardcover ISBN: 978-1-58829-699-3Published: 21 June 2007

  • Softcover ISBN: 978-1-61737-725-9Published: 19 November 2010

  • eBook ISBN: 978-1-60327-118-9Published: 07 February 2008

  • Series ISSN: 1064-3745

  • Series E-ISSN: 1940-6029

  • Edition Number: 1

  • Number of Pages: XV, 438

  • Number of Illustrations: 106 b/w illustrations, 5 illustrations in colour

  • Topics: Bioinformatics, Life Sciences, general, Theory of Computation, Immunology, Human Genetics, Cell Biology

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