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  • © 2009

Systems Biology and Biotechnology of Escherichia coli

Editors:

  • Complete and state-of-the-art coverage of systems biology and biotechnology of E. coli
  • Coverage of all levels of omics and genome-scale computational studies in E. coli
  • Comprehensive coverage of engineering E. coli, and biotechnological applications
  • Contributions from world-leading experts in the fields

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Softcover Book USD 219.00
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Hardcover Book USD 219.99
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Table of contents (20 chapters)

  1. Front Matter

    Pages I-XXI
  2. Genomics, Biological Features, and Biotechnological Applications of Escherichia coli B: “Is B for better?!”

    • Sung Ho Yoon, Haeyoung Jeong, Soon-Kyeong Kwon, Jihyun F. Kim
    Pages 1-17
  3. Escherichia coli Genome Engineering and Minimization forthe Construction of a Bioengine

    • Bong Hyun Sung, Jun Hyoung Lee, Sun Chang Kim
    Pages 19-40
  4. Multi-Omics Data-Driven Systems Biology of E. coli

    • Nobuyoshi Ishii, Masaru Tomita
    Pages 41-57
  5. A Medium-Throughput Structural Proteomics Approach Applied to the Genome of E. coli

    • Allan Matte, Irena Ekiel, Zongchao Jia, Kalle Gehring, Miroslaw Cygler
    Pages 59-86
  6. Resources for Escherichia coli Systems Biology

    • Hirotada Mori, Natsuko Yamamoto, Hitomi Dose, Kenji Nakahigashi, Kirill A. Datsenko, Barry L. Wanner
    Pages 87-97
  7. Analysis of E. coli Network

    • Hawoong Jeong
    Pages 113-132
  8. Sensory Transduction Network of E. coli

    • Michael Y. Galperin
    Pages 133-148
  9. Genome-Scale Reconstruction, Modeling, and Simulation of E. coli℉s Metabolic Network

    • Adam M. Feist, Ines Thiele, Bernhard Ø Palsson
    Pages 149-176
  10. Kinetic Modeling of E. coli Enzymes: Integration of in vitro Experimental Data

    • Ekaterina A. Mogilevskaya, Kirill V. Peskov, Eugeniy A. Metelkin, Galina V. Lebedeva, Tatiana Y. Plyusnina, Igor I. Goryanin et al.
    Pages 177-207
  11. Dynamic Modeling of the Central Metabolism of E. coli – Linking Metabolite and Regulatory Networks

    • Timo Hardiman, Karin Lemuth, Martin Siemann-Herzberg, Matthias Reuss
    Pages 209-235
  12. Genome-Scale Models and the Genetic Basis for E. coli Adaptation

    • M. Kenyon Applebee, Bernhard Ø Palsson
    Pages 237-256
  13. Organisation of Complex Escherichia coli Promoters

    • Douglas F. Browning, David C. Grainger, Stephen J. W. Busby
    Pages 257-271
  14. Plasmid Regulation and Systems-Level Effects on Escherichia coli Metabolism

    • Dave Siak-Wei Ow, Dong-Yup Lee, Hsiu-Hui Tung, Sue Lin-Chao
    Pages 273-294
  15. Systems-Level Analysis of Protein Quality in Inclusion Body-Forming Escherichia coli Cells

    • Elena Garcìa-Fruitòs, Nuria Gonzàlez-Montalbàn, Mònica Martìnez-Alonso, Ursula Rinas, Antonio Villaverde
    Pages 295-326
  16. Performance Characteristics for Sensors and Circuits Used to Program E. coli

    • Jeffrey J. Tabor, Eli S. Groban, Christopher A. Voigt
    Pages 401-439

About this book

Systems biology is changing the way biological systems are studied by allowing us to examine the cell and organism as a whole. Systems biotechnology allows optimal design and development of upstream to downstream bioprocesses by taking a systems-approach. E. coli has been a model organism for almost all biological and biotechnological studies. This book brings together for the first time the state-of-the-art reviews by the world-leading experts on systems biology and biotechnological applications of E. coli. The topics covered include genomics and functional genomics, resources for systems biology, network analysis, genome-scale metabolic reconstruction, modelling and simulation, dynamic modelling and simulation, systems-level analysis of evolution, plasmids and expression systems, protein synthesis, production and export, engineering the central metabolism, synthetic biology, and systems metabolic engineering of E. coli. This book provides readers with guidance on how a complex biological system can be studied using E. coli as a model organism. It also presents how to perform synthetic biology and systems metabolic engineering studies on E. coli with successful examples, the approaches of which can be extended to other organisms. This book will be a complete resource for anyone interested in systems biology and biotechnology.

Reviews

"This is a very interesting and powerful collection of chapters covering a wide spectrum of systems biology frontiers in E. coli and written by recognized leaders in the field..... a must have publication for years to come"

Professor Eleftherios Terry Papoutsakis, University of Delaware, U.S.A.

Editors and Affiliations

  • Dept. of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), Yuseong-gu, Republic of Korea (South Korea)

    Sang Yup Lee

Bibliographic Information

Buy it now

Buying options

eBook USD 169.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book USD 219.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Other ways to access